EnhancerDB
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  3. vista48171[chr5:78054356-78054508]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48171[chr5:78054356-78054508]
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Tissue distribution of vista48171
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Transcription factor that possibly regulate vista48171[chr5:78054356-78054508]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535512
chr5 78053960 78054650 NFIC UCSC Txn Factor no Conserved 108535513
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535514
chr5 78053975 78054461 RUNX3 UCSC Txn Factor no Conserved 108535515
chr5 78054336 78054612 USF2 UCSC Txn Factor no Conserved 108535519
chr5 78054345 78054675 BHLHE40 UCSC Txn Factor no Conserved 108535520
chr5 78054344 78054358 POU4F1 JASPAR yes 63622520
chr5 78054344 78054358 POU4F1 JASPAR yes 70669928
chr5 78054344 78054360 POU4F2 JASPAR yes 63622521
chr5 78054344 78054360 POU4F3 JASPAR yes 63622522
chr5 78054344 78054360 POU4F2 JASPAR yes 70669929
chr5 78054344 78054360 POU4F3 JASPAR yes 70669930
chr5 78054345 78054361 POU4F3 JASPAR yes 63622523
chr5 78054345 78054361 POU4F3 JASPAR yes 70669931
chr5 78054347 78054361 POU4F1 JASPAR yes 63622524
chr5 78054347 78054361 POU4F1 JASPAR yes 70669932
chr5 78054366 78054369 MYB TRANSFAC yes 63622525
chr5 78054366 78054369 MYB TRANSFAC yes 70669933
chr5 78054378 78054387 SRY JASPAR yes 63622526
chr5 78054378 78054387 SRY JASPAR yes 70669934
chr5 78054379 78054391 FOXC2 JASPAR yes 63622527
chr5 78054379 78054391 FOXC2 JASPAR yes 70669935
chr5 78054380 78054392 FOXI1 JASPAR yes 63622528
chr5 78054380 78054392 FOXI1 JASPAR yes 70669936
chr5 78054384 78054390 HiNF-A TRANSFAC yes 63622529
chr5 78054384 78054390 HiNF-A TRANSFAC yes 70669937
chr5 78054389 78054393 YY1 TRANSFAC yes 63622530
chr5 78054389 78054393 YY1 TRANSFAC yes 70669938
chr5 78054389 78054401 TEAD1 JASPAR yes 63622531
chr5 78054389 78054401 TEAD1 JASPAR yes 70669939
chr5 78054399 78054403 TEAD2 TRANSFAC yes 63622532
chr5 78054399 78054403 TEAD2 TRANSFAC yes 70669940
chr5 78054401 78054404 MYB TRANSFAC yes 63622533
chr5 78054401 78054404 MYB TRANSFAC yes 70669941
chr5 78054401 78054412 RUNX1 JASPAR yes 63622534
chr5 78054401 78054412 RUNX1 JASPAR yes 70669942
chr5 78054424 78054435 USF1 JASPAR yes 63622535
chr5 78054424 78054435 USF2 JASPAR yes 63622536
chr5 78054424 78054435 USF1 JASPAR yes 70669943
chr5 78054424 78054435 USF2 JASPAR yes 70669944
chr5 78054425 78054435 SREBF2 JASPAR yes 63622537
chr5 78054425 78054435 TFE3 JASPAR yes 63622538
chr5 78054425 78054435 TFEB JASPAR yes 63622539
chr5 78054425 78054435 TFEC JASPAR yes 63622540
chr5 78054425 78054435 SREBF2 JASPAR yes 70669945
chr5 78054425 78054435 TFE3 JASPAR yes 70669946
chr5 78054425 78054435 TFEB JASPAR yes 70669947
chr5 78054425 78054435 TFEC JASPAR yes 70669948
chr5 78054435 78054447 MEF2A JASPAR yes 63622541
chr5 78054435 78054447 MEF2A JASPAR yes 70669949
chr5 78054441 78054453 POU2F1 JASPAR yes 63622542
chr5 78054441 78054453 POU2F1 JASPAR yes 70669950
chr5 78054441 78054454 POU3F3 JASPAR yes 63622543
chr5 78054441 78054454 POU3F3 JASPAR yes 70669951
chr5 78054441 78054455 POU1F1 JASPAR yes 63622544
chr5 78054441 78054455 POU1F1 JASPAR yes 70669952
chr5 78054452 78054456 YY1 TRANSFAC yes 63622545
chr5 78054452 78054456 YY1 TRANSFAC yes 70669953
chr5 78054453 78054467 NR2F1 JASPAR yes 63622546
chr5 78054453 78054467 NR2F1 JASPAR yes 70669954
chr5 78054456 78054462 TCF1 TRANSFAC yes 63622547
chr5 78054456 78054462 TCF1 TRANSFAC yes 70669955
chr5 78054457 78054478 IRF1 JASPAR yes 63622548
chr5 78054457 78054478 IRF1 JASPAR yes 70669956
chr5 78054460 78054474 SPI1 JASPAR yes 63622549
chr5 78054460 78054474 SPI1 JASPAR yes 70669957
chr5 78054461 78054475 IRF8 JASPAR yes 63622550
chr5 78054461 78054475 IRF8 JASPAR yes 70669958
chr5 78054463 78054470 SPIB JASPAR yes 63622551
chr5 78054463 78054470 SPIB JASPAR yes 70669959
chr5 78054475 78054486 ESRRB JASPAR yes 63622552
chr5 78054475 78054486 ESRRB JASPAR yes 70669960
SNP sites on vista48171[chr5:78054356-78054508]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78054495 rs570645849 T C
BHLHE40 NFIC USF2
8329019
Genes possibly regulated by vista48171[chr5:78054356-78054508]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 77781038 78065844 - LHFPL2 ENSG00000145685.9 78065844 0.73 0.99 5484 88664
Expression level of Genes
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miRNAs possibly regulated by vista48171[chr5:78054356-78054508]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results