EnhancerDB
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  3. vista48172[chr5:78056204-78056542]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48172[chr5:78056204-78056542]
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Tissue distribution of vista48172
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Transcription factor that possibly regulate vista48172[chr5:78056204-78056542]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78056217 78056221 NFE TRANSFAC yes 63622898
chr5 78056217 78056221 NFE TRANSFAC yes 70669961
chr5 78056240 78056249 ZEB1 JASPAR yes 63622899
chr5 78056240 78056249 ZEB1 JASPAR yes 70669962
chr5 78056241 78056251 FIGLA JASPAR yes 63622900
chr5 78056241 78056251 TCF3 JASPAR yes 63622901
chr5 78056241 78056251 TCF4 JASPAR yes 63622902
chr5 78056241 78056251 FIGLA JASPAR yes 70669963
chr5 78056241 78056251 TCF3 JASPAR yes 70669964
chr5 78056241 78056251 TCF4 JASPAR yes 70669965
chr5 78056242 78056251 SNAI2 JASPAR yes 63622903
chr5 78056242 78056251 SNAI2 JASPAR yes 70669966
chr5 78056243 78056248 USF2 TRANSFAC yes 63622904
chr5 78056243 78056248 USF2 TRANSFAC yes 70669967
chr5 78056248 78056261 SCRT2 JASPAR yes 63622905
chr5 78056248 78056261 SCRT2 JASPAR yes 70669968
chr5 78056252 78056262 FIGLA JASPAR yes 63622906
chr5 78056252 78056262 ID4 JASPAR yes 63622907
chr5 78056252 78056262 MSC JASPAR yes 63622908
chr5 78056252 78056262 TCF3 JASPAR yes 63622909
chr5 78056252 78056262 TCF4 JASPAR yes 63622910
chr5 78056252 78056262 FIGLA JASPAR yes 70669969
chr5 78056252 78056262 ID4 JASPAR yes 70669970
chr5 78056252 78056262 MSC JASPAR yes 70669971
chr5 78056252 78056262 TCF3 JASPAR yes 70669972
chr5 78056252 78056262 TCF4 JASPAR yes 70669973
chr5 78056253 78056262 SNAI2 JASPAR yes 63622911
chr5 78056253 78056262 SNAI2 JASPAR yes 70669974
chr5 78056254 78056259 USF2 TRANSFAC yes 63622912
chr5 78056254 78056259 USF2 TRANSFAC yes 70669975
chr5 78056269 78056287 NR3C1 JASPAR yes 63622913
chr5 78056269 78056287 NR3C1 JASPAR yes 70669976
chr5 78056272 78056278 YY1 JASPAR yes 63622914
chr5 78056272 78056278 YY1 JASPAR yes 70669977
chr5 78056272 78056289 ZNF410 JASPAR yes 63622915
chr5 78056272 78056289 ZNF410 JASPAR yes 70669978
chr5 78056278 78056286 EHF JASPAR yes 63622916
chr5 78056278 78056286 EHF JASPAR yes 70669979
chr5 78056286 78056292 SOX10 JASPAR yes 63622917
chr5 78056286 78056292 SOX10 JASPAR yes 70669980
chr5 78056299 78056312 ATF4 JASPAR yes 63622918
chr5 78056299 78056312 ATF4 JASPAR yes 70669981
chr5 78056308 78056325 PAX1 JASPAR yes 63622919
chr5 78056308 78056325 PAX9 JASPAR yes 63622920
chr5 78056308 78056325 PAX1 JASPAR yes 70669982
chr5 78056308 78056325 PAX9 JASPAR yes 70669983
chr5 78056318 78056322 YY1 TRANSFAC yes 63622921
chr5 78056318 78056322 YY1 TRANSFAC yes 70669984
chr5 78056330 78056351 ZNF263 JASPAR yes 63622922
chr5 78056330 78056351 ZNF263 JASPAR yes 70669985
chr5 78056336 78056357 ZNF263 JASPAR yes 63622923
chr5 78056336 78056357 ZNF263 JASPAR yes 70669986
chr5 78056337 78056358 ZNF263 JASPAR yes 63622924
chr5 78056337 78056358 ZNF263 JASPAR yes 70669987
chr5 78056340 78056361 ZNF263 JASPAR yes 63622925
chr5 78056340 78056361 ZNF263 JASPAR yes 70669988
chr5 78056343 78056364 ZNF263 JASPAR yes 63622926
chr5 78056343 78056364 ZNF263 JASPAR yes 70669989
chr5 78056345 78056352 SPIB JASPAR yes 63622927
chr5 78056345 78056352 SPIB JASPAR yes 70669990
chr5 78056346 78056367 ZNF263 JASPAR yes 63622928
chr5 78056346 78056367 ZNF263 JASPAR yes 70669991
chr5 78056348 78056361 ELF1 JASPAR yes 63622929
chr5 78056348 78056361 ELF1 JASPAR yes 70669992
chr5 78056348 78056362 SPI1 JASPAR yes 63622930
chr5 78056348 78056362 SPIC JASPAR yes 63622931
chr5 78056348 78056362 SPI1 JASPAR yes 70669993
chr5 78056348 78056362 SPIC JASPAR yes 70669994
chr5 78056352 78056362 POU6F2 JASPAR yes 63622932
chr5 78056352 78056362 POU6F2 JASPAR yes 70669995
chr5 78056356 78056360 YY1 TRANSFAC yes 63622933
chr5 78056356 78056360 YY1 TRANSFAC yes 70669996
chr5 78056358 78056370 PBX1 JASPAR yes 63622934
chr5 78056358 78056370 PBX1 JASPAR yes 70669997
chr5 78056379 78056383 NFE TRANSFAC yes 63622935
chr5 78056379 78056383 NFE TRANSFAC yes 70669998
chr5 78056381 78056391 SREBF1 JASPAR yes 63622936
chr5 78056381 78056391 SREBF1 JASPAR yes 70669999
chr5 78056384 78056404 RREB1 JASPAR yes 63622937
chr5 78056384 78056404 RREB1 JASPAR yes 70670000
chr5 78056392 78056398 TBP TRANSFAC yes 63622938
chr5 78056392 78056398 TBP TRANSFAC yes 70670001
chr5 78056395 78056409 SPI1 JASPAR yes 63622939
chr5 78056395 78056409 SPI1 JASPAR yes 70670002
chr5 78056403 78056414 FLI1 JASPAR yes 63622940
chr5 78056403 78056414 FLI1 JASPAR yes 70670003
chr5 78056403 78056416 ELF3 JASPAR yes 63622941
chr5 78056403 78056416 ELF3 JASPAR yes 70670004
chr5 78056404 78056414 ETV6 JASPAR yes 63622942
chr5 78056404 78056414 ETV6 JASPAR yes 70670005
chr5 78056404 78056415 ELF5 JASPAR yes 63622943
chr5 78056404 78056415 ELF5 JASPAR yes 70670006
chr5 78056404 78056416 EHF JASPAR yes 63622944
chr5 78056404 78056416 EHF JASPAR yes 70670007
chr5 78056404 78056417 ELF1 JASPAR yes 63622945
chr5 78056404 78056417 ELF1 JASPAR yes 70670008
chr5 78056404 78056418 SPI1 JASPAR yes 63622946
chr5 78056404 78056418 SPI1 JASPAR yes 70670009
chr5 78056405 78056412 SPI1 JASPAR yes 63622947
chr5 78056405 78056412 SPI1 JASPAR yes 70670010
chr5 78056405 78056413 EHF JASPAR yes 63622948
chr5 78056405 78056413 EHF JASPAR yes 70670011
chr5 78056413 78056422 CDX1 JASPAR yes 63622949
chr5 78056413 78056422 CDX1 JASPAR yes 70670012
chr5 78056413 78056424 CDX2 JASPAR yes 63622950
chr5 78056413 78056424 CDX2 JASPAR yes 70670013
chr5 78056416 78056434 ESR2 JASPAR yes 63622951
chr5 78056416 78056434 ESR2 JASPAR yes 70670014
chr5 78056417 78056432 ESR2 JASPAR yes 63622952
chr5 78056417 78056432 ESR2 JASPAR yes 70670015
chr5 78056418 78056433 AR JASPAR yes 63622953
chr5 78056418 78056433 AR JASPAR yes 70670016
chr5 78056437 78056448 FLI1 JASPAR yes 63622954
chr5 78056437 78056448 FLI1 JASPAR yes 70670017
chr5 78056438 78056449 ELF5 JASPAR yes 63622955
chr5 78056438 78056449 ETV2 JASPAR yes 63622956
chr5 78056438 78056449 ELF5 JASPAR yes 70670018
chr5 78056438 78056449 ETV2 JASPAR yes 70670019
chr5 78056438 78056451 ELF1 JASPAR yes 63622957
chr5 78056438 78056451 ELF1 JASPAR yes 70670020
chr5 78056438 78056452 SPI1 JASPAR yes 63622958
chr5 78056438 78056452 SPIC JASPAR yes 63622959
chr5 78056438 78056452 SPI1 JASPAR yes 70670021
chr5 78056438 78056452 SPIC JASPAR yes 70670022
chr5 78056439 78056446 SPI1 JASPAR yes 63622960
chr5 78056439 78056446 SPI1 JASPAR yes 70670023
chr5 78056439 78056447 FEV JASPAR yes 63622961
chr5 78056439 78056447 FEV JASPAR yes 70670024
chr5 78056441 78056446 ETS2 TRANSFAC yes 63622962
chr5 78056441 78056446 ETS2 TRANSFAC yes 70670025
chr5 78056446 78056464 IRF2 JASPAR yes 63622963
chr5 78056446 78056464 IRF2 JASPAR yes 70670026
chr5 78056447 78056468 IRF1 JASPAR yes 63622964
chr5 78056447 78056468 IRF1 JASPAR yes 70670027
chr5 78056457 78056468 ETV2 JASPAR yes 63622965
chr5 78056457 78056468 ETV2 JASPAR yes 70670028
chr5 78056458 78056466 FEV JASPAR yes 63622966
chr5 78056458 78056466 FEV JASPAR yes 70670029
chr5 78056460 78056467 SPIB JASPAR yes 63622967
chr5 78056460 78056467 SPIB JASPAR yes 70670030
chr5 78056461 78056482 ZNF263 JASPAR yes 63622968
chr5 78056461 78056482 ZNF263 JASPAR yes 70670031
chr5 78056474 78056487 HSF2 JASPAR yes 63622969
chr5 78056474 78056487 HSF2 JASPAR yes 70670032
chr5 78056478 78056489 STAT3 JASPAR yes 63622970
chr5 78056478 78056489 STAT3 JASPAR yes 70670033
chr5 78056487 78056493 SP1 TRANSFAC yes 63622971
chr5 78056487 78056493 SP1 TRANSFAC yes 70670034
chr5 78056488 78056493 SP1 TRANSFAC yes 63622972
chr5 78056488 78056493 SP1 TRANSFAC yes 70670035
chr5 78056524 78056532 EHF JASPAR yes 63622973
chr5 78056524 78056532 EHF JASPAR yes 70670036
chr5 78056534 78056541 JUN TRANSFAC yes 63622974
chr5 78056534 78056541 JUN TRANSFAC yes 70670037
SNP sites on vista48172[chr5:78056204-78056542]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78056269 rs116226340 T C
NR3C1
8329044
chr5 78056337 rs139645367 G T
ZNF263
8329045
chr5 78056531 rs564483843 T C
EHF
8329046
Genes possibly regulated by vista48172[chr5:78056204-78056542]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 77781038 78065844 - LHFPL2 ENSG00000145685.9 78065844 0.73 0.99 5484 90698
Expression level of Genes
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miRNAs possibly regulated by vista48172[chr5:78056204-78056542]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results