EnhancerDB
  1. Home
  2. Enhancers
  3. vista48193[chr5:78856687-78856763]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48193[chr5:78856687-78856763]
Back to top
Tissue distribution of vista48193
Back to top
Transcription factor that possibly regulate vista48193[chr5:78856687-78856763]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78856677 78856687 TFEC JASPAR yes 63667490
chr5 78856677 78856687 TFEC JASPAR yes 70670692
chr5 78856677 78856688 USF2 JASPAR yes 63667491
chr5 78856677 78856688 USF2 JASPAR yes 70670693
chr5 78856683 78856689 JUN TRANSFAC yes 63667492
chr5 78856683 78856689 JUN TRANSFAC yes 70670694
chr5 78856691 78856702 NFKB1 JASPAR yes 63667493
chr5 78856691 78856702 NFKB1 JASPAR yes 70670695
chr5 78856691 78856704 NFKB1 JASPAR yes 63667494
chr5 78856691 78856704 NFKB1 JASPAR yes 70670696
chr5 78856692 78856702 NFKB1 JASPAR yes 63667495
chr5 78856692 78856702 NFKB1 JASPAR yes 70670697
chr5 78856692 78856703 NFKB1 JASPAR yes 63667496
chr5 78856692 78856703 NFKB1 JASPAR yes 70670698
chr5 78856693 78856710 BCL6B JASPAR yes 63667497
chr5 78856693 78856710 BCL6B JASPAR yes 70670699
chr5 78856697 78856704 SPIB JASPAR yes 63667498
chr5 78856697 78856704 SPIB JASPAR yes 70670700
chr5 78856701 78856713 DBP JASPAR yes 63667499
chr5 78856701 78856713 HLF JASPAR yes 63667500
chr5 78856701 78856713 TEF JASPAR yes 63667501
chr5 78856701 78856713 DBP JASPAR yes 70670701
chr5 78856701 78856713 HLF JASPAR yes 70670702
chr5 78856701 78856713 TEF JASPAR yes 70670703
chr5 78856703 78856714 NFIL3 JASPAR yes 63667502
chr5 78856703 78856714 NFIL3 JASPAR yes 70670704
chr5 78856707 78856715 DLX6 JASPAR yes 63667503
chr5 78856707 78856715 MSX1 JASPAR yes 63667504
chr5 78856707 78856715 DLX6 JASPAR yes 70670705
chr5 78856707 78856715 MSX1 JASPAR yes 70670706
chr5 78856721 78856739 MAFF JASPAR yes 63667505
chr5 78856721 78856739 MAFF JASPAR yes 70670707
chr5 78856752 78856767 IRF9 JASPAR yes 63667506
chr5 78856752 78856767 IRF9 JASPAR yes 70670708
chr5 78856754 78856768 STAT1 JASPAR yes 63667507
chr5 78856754 78856768 STAT1 JASPAR yes 70670709
chr5 78856754 78856769 STAT2 JASPAR yes 63667508
chr5 78856754 78856769 STAT2 JASPAR yes 70670710
SNP sites on vista48193[chr5:78856687-78856763]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78856733 rs56018035 A T
MAFF
8332740
Genes possibly regulated by vista48193[chr5:78856687-78856763]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 78668459 78810040 - HOMER1 ENSG00000152413.10 78810040 0.81 0.99 5491 53353
chr5 78907943 78982471 + PAPD4 ENSG00000164329.9 78907943 0.72 0.99 5492 48820
Expression level of Genes
Back to top
miRNAs possibly regulated by vista48193[chr5:78856687-78856763]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results