EnhancerDB
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  3. vista48195[chr5:78857523-78857719]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48195[chr5:78857523-78857719]
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Tissue distribution of vista48195
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Transcription factor that possibly regulate vista48195[chr5:78857523-78857719]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78857514 78857534 TP63 JASPAR yes 63667642
chr5 78857514 78857534 TP63 JASPAR yes 70670758
chr5 78857546 78857550 YY1 TRANSFAC yes 63667643
chr5 78857546 78857550 YY1 TRANSFAC yes 70670759
chr5 78857602 78857612 BARHL2 JASPAR yes 63667644
chr5 78857602 78857612 BARHL2 JASPAR yes 70670760
chr5 78857604 78857608 YY1 TRANSFAC yes 63667645
chr5 78857604 78857608 YY1 TRANSFAC yes 70670761
chr5 78857604 78857615 HOXC13 JASPAR yes 63667646
chr5 78857604 78857615 HOXC13 JASPAR yes 70670762
chr5 78857617 78857623 NFE2 TRANSFAC yes 63667647
chr5 78857617 78857623 NFE2 TRANSFAC yes 70670763
chr5 78857627 78857642 NFYB JASPAR yes 63667648
chr5 78857627 78857642 NFYB JASPAR yes 70670764
chr5 78857629 78857645 NFYA JASPAR yes 63667649
chr5 78857629 78857645 NFYA JASPAR yes 70670765
chr5 78857630 78857648 NFYA JASPAR yes 63667650
chr5 78857630 78857648 NFYA JASPAR yes 70670766
chr5 78857631 78857651 RREB1 JASPAR yes 63667651
chr5 78857631 78857651 RREB1 JASPAR yes 70670767
chr5 78857634 78857638 H1TF2 TRANSFAC yes 63667652
chr5 78857634 78857638 NFE TRANSFAC yes 63667653
chr5 78857634 78857638 SRF TRANSFAC yes 63667654
chr5 78857634 78857638 H1TF2 TRANSFAC yes 70670768
chr5 78857634 78857638 NFE TRANSFAC yes 70670769
chr5 78857634 78857638 SRF TRANSFAC yes 70670770
chr5 78857639 78857653 GLIS3 JASPAR yes 63667655
chr5 78857639 78857653 GLIS3 JASPAR yes 70670771
chr5 78857642 78857658 ZNF143 JASPAR yes 63667656
chr5 78857642 78857658 ZNF143 JASPAR yes 70670772
chr5 78857642 78857663 ZNF263 JASPAR yes 63667657
chr5 78857642 78857663 ZNF263 JASPAR yes 70670773
chr5 78857653 78857663 SP1 JASPAR yes 63667658
chr5 78857653 78857663 SP1 JASPAR yes 70670774
chr5 78857696 78857701 SP1 TRANSFAC yes 63667659
chr5 78857696 78857701 SP1 TRANSFAC yes 70670775
chr5 78857698 78857703 TFAP2A TRANSFAC yes 63667660
chr5 78857698 78857703 TFAP2A TRANSFAC yes 70670776
chr5 78857698 78857704 MZF1 JASPAR yes 63667661
chr5 78857698 78857704 MZF1 JASPAR yes 70670777
SNP sites on vista48195[chr5:78857523-78857719]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78857571 rs138685552 T TC no 8332754
chr5 78857621 rs138917957 C A
NFE2
8332755
chr5 78857675 rs191273775 T C no 8332756
chr5 78857696 rs550591090 G T
SP1
8332757
Genes possibly regulated by vista48195[chr5:78857523-78857719]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 78668459 78810040 - HOMER1 ENSG00000152413.10 78810040 0.81 0.99 5491 52517
chr5 78907943 78982471 + PAPD4 ENSG00000164329.9 78907943 0.72 0.99 5492 49776
Expression level of Genes
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miRNAs possibly regulated by vista48195[chr5:78857523-78857719]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results