EnhancerDB
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  3. vista48196[chr5:78886263-78886493]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48196[chr5:78886263-78886493]
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Tissue distribution of vista48196
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Transcription factor that possibly regulate vista48196[chr5:78886263-78886493]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78886270 78886283 EOMES JASPAR yes 63671029
chr5 78886270 78886283 EOMES JASPAR yes 70670778
chr5 78886273 78886283 SREBF1 JASPAR yes 63671030
chr5 78886273 78886283 SREBF2 JASPAR yes 63671031
chr5 78886273 78886283 SREBF1 JASPAR yes 70670779
chr5 78886273 78886283 SREBF2 JASPAR yes 70670780
chr5 78886274 78886282 MGA JASPAR yes 63671032
chr5 78886274 78886282 MGA JASPAR yes 70670781
chr5 78886283 78886293 TEAD1 JASPAR yes 63671033
chr5 78886283 78886293 TEAD4 JASPAR yes 63671034
chr5 78886283 78886293 TEAD1 JASPAR yes 70670782
chr5 78886283 78886293 TEAD4 JASPAR yes 70670783
chr5 78886283 78886295 TEAD1 JASPAR yes 63671035
chr5 78886283 78886295 TEAD1 JASPAR yes 70670784
chr5 78886284 78886292 TEAD3 JASPAR yes 63671036
chr5 78886284 78886292 TEAD3 JASPAR yes 70670785
chr5 78886314 78886318 NFE TRANSFAC yes 63671037
chr5 78886314 78886318 NFE TRANSFAC yes 70670786
chr5 78886317 78886332 MEF2C JASPAR yes 63671038
chr5 78886317 78886332 MEF2C JASPAR yes 70670787
chr5 78886318 78886333 MEF2A JASPAR yes 63671039
chr5 78886318 78886333 MEF2A JASPAR yes 70670788
chr5 78886319 78886331 MEF2A JASPAR yes 63671040
chr5 78886319 78886331 MEF2B JASPAR yes 63671041
chr5 78886319 78886331 MEF2D JASPAR yes 63671042
chr5 78886319 78886331 MEF2A JASPAR yes 70670789
chr5 78886319 78886331 MEF2B JASPAR yes 70670790
chr5 78886319 78886331 MEF2D JASPAR yes 70670791
chr5 78886320 78886330 MEF2A JASPAR yes 63671043
chr5 78886320 78886330 MEF2A JASPAR yes 70670792
chr5 78886344 78886349 MYB TRANSFAC yes 63671044
chr5 78886344 78886349 MYB TRANSFAC yes 70670793
chr5 78886361 78886372 FOXA1 JASPAR yes 63671045
chr5 78886361 78886372 FOXA1 JASPAR yes 70670794
chr5 78886371 78886390 REST JASPAR yes 63671046
chr5 78886371 78886390 REST JASPAR yes 70670795
chr5 78886377 78886389 INSM1 JASPAR yes 63671047
chr5 78886377 78886389 INSM1 JASPAR yes 70670796
chr5 78886396 78886408 EHF JASPAR yes 63671048
chr5 78886396 78886408 EHF JASPAR yes 70670797
chr5 78886396 78886409 ELF3 JASPAR yes 63671049
chr5 78886396 78886409 ELF3 JASPAR yes 70670798
chr5 78886397 78886408 ELF5 JASPAR yes 63671050
chr5 78886397 78886408 ELF5 JASPAR yes 70670799
chr5 78886399 78886404 ETS2 TRANSFAC yes 63671051
chr5 78886399 78886404 ETS2 TRANSFAC yes 70670800
chr5 78886399 78886407 FEV JASPAR yes 63671052
chr5 78886399 78886407 FEV JASPAR yes 70670801
chr5 78886400 78886407 SPI1 JASPAR yes 63671053
chr5 78886400 78886407 SPI1 JASPAR yes 70670802
chr5 78886407 78886418 EBF1 JASPAR yes 63671054
chr5 78886407 78886418 EBF1 JASPAR yes 70670803
chr5 78886434 78886455 IRF1 JASPAR yes 63671055
chr5 78886434 78886455 IRF1 JASPAR yes 70670804
chr5 78886438 78886452 SPI1 JASPAR yes 63671056
chr5 78886438 78886452 SPI1 JASPAR yes 70670805
chr5 78886438 78886453 STAT2 JASPAR yes 63671057
chr5 78886438 78886453 STAT2 JASPAR yes 70670806
chr5 78886453 78886468 JUND JASPAR yes 63671058
chr5 78886453 78886468 JUND JASPAR yes 70670807
chr5 78886461 78886465 TEAD2 TRANSFAC yes 63671059
chr5 78886461 78886465 TEAD2 TRANSFAC yes 70670808
chr5 78886467 78886479 TAL1 JASPAR yes 63671060
chr5 78886467 78886479 TAL1 JASPAR yes 70670809
chr5 78886468 78886481 ZBTB18 JASPAR yes 63671061
chr5 78886468 78886481 ZBTB18 JASPAR yes 70670810
chr5 78886469 78886479 FIGLA JASPAR yes 63671062
chr5 78886469 78886479 MSC JASPAR yes 63671063
chr5 78886469 78886479 TFAP4 JASPAR yes 63671064
chr5 78886469 78886479 FIGLA JASPAR yes 70670811
chr5 78886469 78886479 MSC JASPAR yes 70670812
chr5 78886469 78886479 TFAP4 JASPAR yes 70670813
chr5 78886473 78886483 NFATC3 JASPAR yes 63671065
chr5 78886473 78886483 NFATC3 JASPAR yes 70670814
chr5 78886475 78886482 NFATC2 JASPAR yes 63671066
chr5 78886475 78886482 NFATC2 JASPAR yes 70670815
SNP sites on vista48196[chr5:78886263-78886493]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78886280 rs73117464 C G
EOMES MGA SREBF1 SREBF2
8332986
chr5 78886488 rs114002919 C A no 8332987
Genes possibly regulated by vista48196[chr5:78886263-78886493]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 78668459 78810040 - HOMER1 ENSG00000152413.10 78810040 0.81 0.99 5491 23777
chr5 78907943 78982471 + PAPD4 ENSG00000164329.9 78907943 0.72 0.99 5492 78550
chr5 78985700 79096063 + CMYA5 ENSG00000164309.10 78985700 0.97 0.98 5493 793
Expression level of Genes
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miRNAs possibly regulated by vista48196[chr5:78886263-78886493]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results