EnhancerDB
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  3. vista48197[chr5:78990549-78990790]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48197[chr5:78990549-78990790]
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Tissue distribution of vista48197
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Transcription factor that possibly regulate vista48197[chr5:78990549-78990790]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 78990560 78990568 FOXO3 JASPAR yes 63674721
chr5 78990560 78990568 FOXO3 JASPAR yes 70670816
chr5 78990560 78990570 NFATC3 JASPAR yes 63674722
chr5 78990560 78990570 NFATC3 JASPAR yes 70670817
chr5 78990570 78990585 MEF2A JASPAR yes 63674723
chr5 78990570 78990585 MEF2A JASPAR yes 70670818
chr5 78990571 78990583 FOXI1 JASPAR yes 63674724
chr5 78990571 78990583 FOXI1 JASPAR yes 70670819
chr5 78990571 78990586 MEF2C JASPAR yes 63674725
chr5 78990571 78990586 MEF2C JASPAR yes 70670820
chr5 78990572 78990584 MEF2A JASPAR yes 63674726
chr5 78990572 78990584 MEF2B JASPAR yes 63674727
chr5 78990572 78990584 MEF2D JASPAR yes 63674728
chr5 78990572 78990584 MEF2A JASPAR yes 70670821
chr5 78990572 78990584 MEF2B JASPAR yes 70670822
chr5 78990572 78990584 MEF2D JASPAR yes 70670823
chr5 78990573 78990583 MEF2A JASPAR yes 63674729
chr5 78990573 78990583 MEF2A JASPAR yes 70670824
chr5 78990574 78990578 YY1 TRANSFAC yes 63674730
chr5 78990574 78990578 YY1 TRANSFAC yes 70670825
chr5 78990590 78990603 ZBTB18 JASPAR yes 63674731
chr5 78990590 78990603 ZBTB18 JASPAR yes 70670826
chr5 78990596 78990607 NRL JASPAR yes 63674732
chr5 78990596 78990607 NRL JASPAR yes 70670827
chr5 78990629 78990633 YY1 TRANSFAC yes 63674733
chr5 78990629 78990633 YY1 TRANSFAC yes 70670828
chr5 78990648 78990661 NR2F1 JASPAR yes 63674734
chr5 78990648 78990661 NR2F1 JASPAR yes 70670829
chr5 78990649 78990657 CREB1 JASPAR yes 63674735
chr5 78990649 78990657 CREB1 JASPAR yes 70670830
chr5 78990652 78990656 ESR1 TRANSFAC yes 63674736
chr5 78990652 78990656 ESR1 TRANSFAC yes 70670831
chr5 78990656 78990666 NFATC3 JASPAR yes 63674737
chr5 78990656 78990666 NFATC3 JASPAR yes 70670832
chr5 78990673 78990683 SP1 JASPAR yes 63674738
chr5 78990673 78990683 SP1 JASPAR yes 70670833
chr5 78990675 78990681 MAZ TRANSFAC yes 63674739
chr5 78990675 78990681 MAZ TRANSFAC yes 70670834
chr5 78990701 78990722 ZNF263 JASPAR yes 63674740
chr5 78990701 78990722 ZNF263 JASPAR yes 70670835
chr5 78990714 78990719 GATA2 JASPAR yes 63674741
chr5 78990714 78990719 GATA2 JASPAR yes 70670836
chr5 78990721 78990728 GATA3 TRANSFAC yes 63674742
chr5 78990721 78990728 GATA3 TRANSFAC yes 70670837
chr5 78990721 78990729 GATA5 JASPAR yes 63674743
chr5 78990721 78990729 GATA5 JASPAR yes 70670838
chr5 78990724 78990727 MYB TRANSFAC yes 63674744
chr5 78990724 78990727 MYB TRANSFAC yes 70670839
chr5 78990730 78990745 SCRT1 JASPAR yes 63674745
chr5 78990730 78990745 SCRT1 JASPAR yes 70670840
chr5 78990754 78990770 SOX4 JASPAR yes 63674746
chr5 78990754 78990770 SOX4 JASPAR yes 70670841
chr5 78990755 78990770 SOX21 JASPAR yes 63674747
chr5 78990755 78990770 SOX21 JASPAR yes 70670842
chr5 78990758 78990762 YY1 TRANSFAC yes 63674748
chr5 78990758 78990762 YY1 TRANSFAC yes 70670843
chr5 78990760 78990770 NKX2-3 JASPAR yes 63674749
chr5 78990760 78990770 NKX2-3 JASPAR yes 70670844
chr5 78990761 78990769 ISL2 JASPAR yes 63674750
chr5 78990761 78990769 ISL2 JASPAR yes 70670845
chr5 78990761 78990770 NKX3-2 JASPAR yes 63674751
chr5 78990761 78990770 NKX3-2 JASPAR yes 70670846
chr5 78990776 78990790 POU4F1 JASPAR yes 63674752
chr5 78990776 78990790 POU4F1 JASPAR yes 70670847
chr5 78990778 78990783 GATA2 JASPAR yes 63674753
chr5 78990778 78990783 GATA2 JASPAR yes 70670848
chr5 78990781 78990785 YY1 TRANSFAC yes 63674754
chr5 78990781 78990785 YY1 TRANSFAC yes 70670849
chr5 78990786 78990797 ESRRA JASPAR yes 63674755
chr5 78990786 78990797 ESRRB JASPAR yes 63674756
chr5 78990786 78990797 ESRRA JASPAR yes 70670850
chr5 78990786 78990797 ESRRB JASPAR yes 70670851
SNP sites on vista48197[chr5:78990549-78990790]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 78990576 rs112585114 A G
FOXI1 MEF2A MEF2B MEF2C MEF2D YY1
8333388
chr5 78990587 rs562612526 G A no 8333389
chr5 78990667 rs11960421 G A no 8333390
chr5 78990777 rs77551481 A G
POU4F1
8333391
Genes possibly regulated by vista48197[chr5:78990549-78990790]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 78907943 78982471 + PAPD4 ENSG00000164329.9 78907943 0.72 0.99 5492 17394
chr5 78985700 79096063 + CMYA5 ENSG00000164309.10 78985700 0.97 0.98 5493 95151
Expression level of Genes
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miRNAs possibly regulated by vista48197[chr5:78990549-78990790]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results