EnhancerDB
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  3. vista48208[chr5:79458255-79458620]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48208[chr5:79458255-79458620]
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Tissue distribution of vista48208
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Transcription factor that possibly regulate vista48208[chr5:79458255-79458620]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 79458252 79458262 SREBF1 JASPAR yes 63701092
chr5 79458252 79458262 SREBF2 JASPAR yes 63701093
chr5 79458252 79458262 SREBF1 JASPAR yes 70671338
chr5 79458252 79458262 SREBF2 JASPAR yes 70671339
chr5 79458260 79458280 ESR1 JASPAR yes 63701094
chr5 79458260 79458280 ESR1 JASPAR yes 70671340
chr5 79458263 79458281 ESR1 JASPAR yes 63701095
chr5 79458263 79458281 ESR2 JASPAR yes 63701096
chr5 79458263 79458281 ESR1 JASPAR yes 70671341
chr5 79458263 79458281 ESR2 JASPAR yes 70671342
chr5 79458264 79458281 ESR1 JASPAR yes 63701097
chr5 79458264 79458281 ESR1 JASPAR yes 70671343
chr5 79458274 79458277 MYB TRANSFAC yes 63701098
chr5 79458274 79458277 MYB TRANSFAC yes 70671344
chr5 79458292 79458302 SREBF2 JASPAR yes 63701099
chr5 79458292 79458302 SREBF2 JASPAR yes 70671345
chr5 79458292 79458303 USF1 JASPAR yes 63701100
chr5 79458292 79458303 USF2 JASPAR yes 63701101
chr5 79458292 79458303 USF1 JASPAR yes 70671346
chr5 79458292 79458303 USF2 JASPAR yes 70671347
chr5 79458322 79458338 RFX4 JASPAR yes 63701102
chr5 79458322 79458338 RFX4 JASPAR yes 70671348
chr5 79458330 79458345 SCRT1 JASPAR yes 63701103
chr5 79458330 79458345 SCRT1 JASPAR yes 70671349
chr5 79458334 79458343 SNAI2 JASPAR yes 63701104
chr5 79458334 79458343 SNAI2 JASPAR yes 70671350
chr5 79458334 79458344 ID4 JASPAR yes 63701105
chr5 79458334 79458344 TCF3 JASPAR yes 63701106
chr5 79458334 79458344 TCF4 JASPAR yes 63701107
chr5 79458334 79458344 ID4 JASPAR yes 70671351
chr5 79458334 79458344 TCF3 JASPAR yes 70671352
chr5 79458334 79458344 TCF4 JASPAR yes 70671353
chr5 79458349 79458367 MAFF JASPAR yes 63701108
chr5 79458349 79458367 MAFF JASPAR yes 70671354
chr5 79458350 79458365 MAFK JASPAR yes 63701109
chr5 79458350 79458365 MAFK JASPAR yes 70671355
chr5 79458358 79458368 NOTO JASPAR yes 63701110
chr5 79458358 79458368 NOTO JASPAR yes 70671356
chr5 79458361 79458374 POU3F3 JASPAR yes 63701111
chr5 79458361 79458374 POU3F3 JASPAR yes 70671357
chr5 79458381 79458392 DUX4 JASPAR yes 63701112
chr5 79458381 79458392 DUX4 JASPAR yes 70671358
chr5 79458383 79458396 NFKB1 JASPAR yes 63701113
chr5 79458383 79458396 NFKB2 JASPAR yes 63701114
chr5 79458383 79458396 NFKB1 JASPAR yes 70671359
chr5 79458383 79458396 NFKB2 JASPAR yes 70671360
chr5 79458384 79458394 RELA JASPAR yes 63701115
chr5 79458384 79458394 REL JASPAR yes 63701116
chr5 79458384 79458394 RELA JASPAR yes 70671361
chr5 79458384 79458394 REL JASPAR yes 70671362
chr5 79458384 79458395 NFKB1 JASPAR yes 63701117
chr5 79458384 79458395 NFKB1 JASPAR yes 70671363
chr5 79458385 79458395 NFKB1 JASPAR yes 63701118
chr5 79458385 79458395 RELA JASPAR yes 63701119
chr5 79458385 79458395 NFKB1 JASPAR yes 70671364
chr5 79458385 79458395 RELA JASPAR yes 70671365
chr5 79458385 79458396 NFKB1 JASPAR yes 63701120
chr5 79458385 79458396 NFKB1 JASPAR yes 70671366
chr5 79458387 79458392 H4TF1 TRANSFAC yes 63701121
chr5 79458387 79458392 H4TF1 TRANSFAC yes 70671367
chr5 79458415 79458425 TEAD4 JASPAR yes 63701122
chr5 79458415 79458425 TEAD4 JASPAR yes 70671368
chr5 79458421 79458436 TFAP2A JASPAR yes 63701123
chr5 79458421 79458436 TFAP2C JASPAR yes 63701124
chr5 79458421 79458436 TFAP2A JASPAR yes 70671369
chr5 79458421 79458436 TFAP2C JASPAR yes 70671370
chr5 79458422 79458436 TLX1 JASPAR yes 63701125
chr5 79458422 79458436 TLX1 JASPAR yes 70671371
chr5 79458423 79458437 TLX1 JASPAR yes 63701126
chr5 79458423 79458437 TLX1 JASPAR yes 70671372
chr5 79458423 79458438 TFAP2A JASPAR yes 63701127
chr5 79458423 79458438 TFAP2C JASPAR yes 63701128
chr5 79458423 79458438 TFAP2A JASPAR yes 70671373
chr5 79458423 79458438 TFAP2C JASPAR yes 70671374
chr5 79458432 79458438 YY1 JASPAR yes 63701129
chr5 79458432 79458438 YY1 JASPAR yes 70671375
chr5 79458436 79458447 E2F6 JASPAR yes 63701130
chr5 79458436 79458447 E2F6 JASPAR yes 70671376
chr5 79458439 79458447 TBX15 JASPAR yes 63701131
chr5 79458439 79458447 TBX15 JASPAR yes 70671377
chr5 79458440 79458454 PLAG1 JASPAR yes 63701132
chr5 79458440 79458454 PLAG1 JASPAR yes 70671378
chr5 79458445 79458452 E2F1 TRANSFAC yes 63701133
chr5 79458445 79458452 E2F1 TRANSFAC yes 70671379
chr5 79458465 79458482 RXRA JASPAR yes 63701134
chr5 79458465 79458482 RXRA JASPAR yes 70671380
chr5 79458469 79458481 TEAD1 JASPAR yes 63701135
chr5 79458469 79458481 TEAD1 JASPAR yes 70671381
chr5 79458469 79458490 IRF1 JASPAR yes 63701136
chr5 79458469 79458490 IRF1 JASPAR yes 70671382
chr5 79458473 79458487 STAT1 JASPAR yes 63701137
chr5 79458473 79458487 STAT1 JASPAR yes 70671383
chr5 79458473 79458488 STAT2 JASPAR yes 63701138
chr5 79458473 79458488 STAT2 JASPAR yes 70671384
chr5 79458494 79458500 SP1 TRANSFAC yes 63701139
chr5 79458494 79458500 SP1 TRANSFAC yes 70671385
chr5 79458497 79458511 TCF7L2 JASPAR yes 63701140
chr5 79458497 79458511 TCF7L2 JASPAR yes 70671386
chr5 79458543 79458557 STAT1 JASPAR yes 63701141
chr5 79458543 79458557 STAT1 JASPAR yes 70671387
chr5 79458577 79458581 YY1 TRANSFAC yes 63701142
chr5 79458577 79458581 YY1 TRANSFAC yes 70671388
chr5 79458580 79458592 MEF2D JASPAR yes 63701143
chr5 79458580 79458592 MEF2D JASPAR yes 70671389
chr5 79458582 79458586 YY1 TRANSFAC yes 63701144
chr5 79458582 79458586 YY1 TRANSFAC yes 70671390
SNP sites on vista48208[chr5:79458255-79458620]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 79458302 rs576333044 T C
SREBF2 USF1 USF2
8335984
chr5 79458350 rs115169880 C T
MAFF MAFK
8335985
chr5 79458358 rs78329666 A G
MAFF MAFK NOTO
8335986
chr5 79458365 rs77571307 T C
MAFF MAFK NOTO POU3F3
8335987
chr5 79458463 rs78591499 C T no 8335988
chr5 79458500 rs569654863 C G
SP1 TCF7L2
8335989
chr5 79458576 rs542447719 GTTATT G no 8335990
Genes possibly regulated by vista48208[chr5:79458255-79458620]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 79407050 79551898 - SERINC5 ENSG00000164300.11 79551898 0.78 1.0 5496 6722
Expression level of Genes
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miRNAs possibly regulated by vista48208[chr5:79458255-79458620]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results