EnhancerDB
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  3. vista48211[chr5:79506276-79506503]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48211[chr5:79506276-79506503]
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Tissue distribution of vista48211
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Transcription factor that possibly regulate vista48211[chr5:79506276-79506503]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 79506278 79506290 PBX1 JASPAR yes 63706811
chr5 79506278 79506290 PBX1 JASPAR yes 70671491
chr5 79506290 79506298 TBX5 JASPAR yes 63706812
chr5 79506290 79506298 TBX5 JASPAR yes 70671492
chr5 79506298 79506306 FEV JASPAR yes 63706813
chr5 79506298 79506306 FEV JASPAR yes 70671493
chr5 79506336 79506339 MYB TRANSFAC yes 63706814
chr5 79506336 79506339 MYB TRANSFAC yes 70671494
chr5 79506382 79506386 YY1 TRANSFAC yes 63706815
chr5 79506382 79506386 YY1 TRANSFAC yes 70671495
chr5 79506422 79506433 NFIL3 JASPAR yes 63706816
chr5 79506422 79506433 NFIL3 JASPAR yes 70671496
chr5 79506423 79506434 CEBPB JASPAR yes 63706817
chr5 79506423 79506434 CEBPB JASPAR yes 70671497
chr5 79506424 79506434 CEBPD JASPAR yes 63706818
chr5 79506424 79506434 CEBPD JASPAR yes 70671498
chr5 79506424 79506435 CEBPA JASPAR yes 63706819
chr5 79506424 79506435 CEBPA JASPAR yes 70671499
chr5 79506441 79506461 RREB1 JASPAR yes 63706820
chr5 79506441 79506461 RREB1 JASPAR yes 70671500
chr5 79506443 79506463 RREB1 JASPAR yes 63706821
chr5 79506443 79506463 RREB1 JASPAR yes 70671501
chr5 79506452 79506462 CLOCK JASPAR yes 63706822
chr5 79506452 79506462 CLOCK JASPAR yes 70671502
chr5 79506465 79506476 CDX2 JASPAR yes 63706823
chr5 79506465 79506476 CDX2 JASPAR yes 70671503
chr5 79506466 79506477 HOXC11 JASPAR yes 63706824
chr5 79506466 79506477 HOXC12 JASPAR yes 63706825
chr5 79506466 79506477 HOXD12 JASPAR yes 63706826
chr5 79506466 79506477 HOXC11 JASPAR yes 70671504
chr5 79506466 79506477 HOXC12 JASPAR yes 70671505
chr5 79506466 79506477 HOXD12 JASPAR yes 70671506
chr5 79506466 79506481 LEF1 JASPAR yes 63706827
chr5 79506466 79506481 LEF1 JASPAR yes 70671507
chr5 79506467 79506476 CDX1 JASPAR yes 63706828
chr5 79506467 79506476 CDX1 JASPAR yes 70671508
chr5 79506467 79506477 HOXC10 JASPAR yes 63706829
chr5 79506467 79506477 HOXD11 JASPAR yes 63706830
chr5 79506467 79506477 HOXC10 JASPAR yes 70671509
chr5 79506467 79506477 HOXD11 JASPAR yes 70671510
chr5 79506474 79506494 PPARG JASPAR yes 63706831
chr5 79506474 79506494 PPARG JASPAR yes 70671511
chr5 79506482 79506486 NFE TRANSFAC yes 63706832
chr5 79506482 79506486 NFE TRANSFAC yes 70671512
chr5 79506482 79506495 SMAD2 JASPAR yes 63706833
chr5 79506482 79506495 SMAD2 JASPAR yes 70671513
chr5 79506484 79506495 E2F6 JASPAR yes 63706834
chr5 79506484 79506495 E2F6 JASPAR yes 70671514
SNP sites on vista48211[chr5:79506276-79506503]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 79506452 rs75882944 C T
CLOCK RREB1
8336585
Genes possibly regulated by vista48211[chr5:79506276-79506503]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 79407050 79551898 - SERINC5 ENSG00000164300.11 79551898 0.78 1.0 5496 54605
Expression level of Genes
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miRNAs possibly regulated by vista48211[chr5:79506276-79506503]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results