EnhancerDB
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  3. vista48224[chr5:80216788-80217158]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48224[chr5:80216788-80217158]
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Tissue distribution of vista48224
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Transcription factor that possibly regulate vista48224[chr5:80216788-80217158]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 80216864 80217215 REST UCSC Txn Factor no Conserved 108535554
chr5 80216782 80216797 PRDM1 JASPAR yes 63736937
chr5 80216782 80216797 PRDM1 JASPAR yes 70672039
chr5 80216785 80216806 ZNF263 JASPAR yes 63736938
chr5 80216785 80216806 ZNF263 JASPAR yes 70672040
chr5 80216786 80216791 ETS2 TRANSFAC yes 63736939
chr5 80216786 80216791 ETS2 TRANSFAC yes 70672041
chr5 80216794 80216815 ZNF263 JASPAR yes 63736940
chr5 80216794 80216815 ZNF263 JASPAR yes 70672042
chr5 80216821 80216836 RUNX2 JASPAR yes 63736941
chr5 80216821 80216836 RUNX2 JASPAR yes 70672043
chr5 80216822 80216834 SRF JASPAR yes 63736942
chr5 80216822 80216834 SRF JASPAR yes 70672044
chr5 80216824 80216835 RUNX1 JASPAR yes 63736943
chr5 80216824 80216835 RUNX1 JASPAR yes 70672045
chr5 80216825 80216835 RUNX3 JASPAR yes 63736944
chr5 80216825 80216835 RUNX3 JASPAR yes 70672046
chr5 80216830 80216834 ESR1 TRANSFAC yes 63736945
chr5 80216830 80216834 ESR1 TRANSFAC yes 70672047
chr5 80216856 80216871 HNF4G JASPAR yes 63736946
chr5 80216856 80216871 NR2C2 JASPAR yes 63736947
chr5 80216856 80216871 HNF4G JASPAR yes 70672048
chr5 80216856 80216871 NR2C2 JASPAR yes 70672049
chr5 80216857 80216871 NR2F1 JASPAR yes 63736948
chr5 80216857 80216871 RXRB JASPAR yes 63736949
chr5 80216857 80216871 RXRG JASPAR yes 63736950
chr5 80216857 80216871 NR2F1 JASPAR yes 70672050
chr5 80216857 80216871 RXRB JASPAR yes 70672051
chr5 80216857 80216871 RXRG JASPAR yes 70672052
chr5 80216857 80216872 HNF4A JASPAR yes 63736951
chr5 80216857 80216872 HNF4A JASPAR yes 70672053
chr5 80216859 80216863 LFA1 TRANSFAC yes 63736952
chr5 80216859 80216863 LFA1 TRANSFAC yes 70672054
chr5 80216877 80216881 H4TF2 TRANSFAC yes 63736953
chr5 80216877 80216881 H4TF2 TRANSFAC yes 70672055
chr5 80216893 80216903 RORA JASPAR yes 63736954
chr5 80216893 80216903 RORA JASPAR yes 70672056
chr5 80216898 80216902 ESR1 TRANSFAC yes 63736955
chr5 80216898 80216902 ESR1 TRANSFAC yes 70672057
chr5 80216928 80216939 TBX20 JASPAR yes 63736956
chr5 80216928 80216939 TBX20 JASPAR yes 70672058
chr5 80216951 80216961 OLIG2 JASPAR yes 63736957
chr5 80216951 80216961 OLIG3 JASPAR yes 63736958
chr5 80216951 80216961 OLIG2 JASPAR yes 70672059
chr5 80216951 80216961 OLIG3 JASPAR yes 70672060
chr5 80216951 80216963 TAL1 JASPAR yes 63736959
chr5 80216951 80216963 TAL1 JASPAR yes 70672061
chr5 80216958 80216962 H4TF2 TRANSFAC yes 63736960
chr5 80216958 80216962 H4TF2 TRANSFAC yes 70672062
chr5 80216973 80216977 LFA1 TRANSFAC yes 63736961
chr5 80216973 80216977 LFA1 TRANSFAC yes 70672063
chr5 80216983 80216993 TBX21 JASPAR yes 63736962
chr5 80216983 80216993 TBX21 JASPAR yes 70672064
chr5 80216983 80216994 TBX20 JASPAR yes 63736963
chr5 80216983 80216994 TBX2 JASPAR yes 63736964
chr5 80216983 80216994 TBX20 JASPAR yes 70672065
chr5 80216983 80216994 TBX2 JASPAR yes 70672066
chr5 80216983 80216996 EOMES JASPAR yes 63736965
chr5 80216983 80216996 EOMES JASPAR yes 70672067
chr5 80216984 80216992 MGA JASPAR yes 63736966
chr5 80216984 80216992 TBX15 JASPAR yes 63736967
chr5 80216984 80216992 TBX1 JASPAR yes 63736968
chr5 80216984 80216992 TBX4 JASPAR yes 63736969
chr5 80216984 80216992 TBX5 JASPAR yes 63736970
chr5 80216984 80216992 MGA JASPAR yes 70672068
chr5 80216984 80216992 TBX15 JASPAR yes 70672069
chr5 80216984 80216992 TBX1 JASPAR yes 70672070
chr5 80216984 80216992 TBX4 JASPAR yes 70672071
chr5 80216984 80216992 TBX5 JASPAR yes 70672072
chr5 80216984 80216994 TBR1 JASPAR yes 63736971
chr5 80216984 80216994 TBR1 JASPAR yes 70672073
chr5 80216997 80217002 NFY TRANSFAC yes 63736972
chr5 80216997 80217002 NFY TRANSFAC yes 70672074
chr5 80216999 80217005 NFIC JASPAR yes 63736973
chr5 80216999 80217005 NFIC JASPAR yes 70672075
chr5 80216999 80217013 TLX1 JASPAR yes 63736974
chr5 80216999 80217013 TLX1 JASPAR yes 70672076
chr5 80217000 80217014 TLX1 JASPAR yes 63736975
chr5 80217000 80217014 TLX1 JASPAR yes 70672077
chr5 80217021 80217025 ESR1 TRANSFAC yes 63736976
chr5 80217021 80217025 ESR1 TRANSFAC yes 70672078
chr5 80217035 80217044 ZEB1 JASPAR yes 63736977
chr5 80217035 80217044 ZEB1 JASPAR yes 70672079
chr5 80217043 80217047 H1TF2 TRANSFAC yes 63736978
chr5 80217043 80217047 NFE TRANSFAC yes 63736979
chr5 80217043 80217047 SRF TRANSFAC yes 63736980
chr5 80217043 80217047 H1TF2 TRANSFAC yes 70672080
chr5 80217043 80217047 NFE TRANSFAC yes 70672081
chr5 80217043 80217047 SRF TRANSFAC yes 70672082
chr5 80217046 80217061 HNF4G JASPAR yes 63736981
chr5 80217046 80217061 HNF4G JASPAR yes 70672083
chr5 80217047 80217062 HNF4A JASPAR yes 63736982
chr5 80217047 80217062 HNF4A JASPAR yes 70672084
chr5 80217052 80217065 NR2F1 JASPAR yes 63736983
chr5 80217052 80217065 NR2F1 JASPAR yes 70672085
chr5 80217056 80217060 ESR1 TRANSFAC yes 63736984
chr5 80217056 80217060 ESR1 TRANSFAC yes 70672086
chr5 80217057 80217068 NRL JASPAR yes 63736985
chr5 80217057 80217068 NRL JASPAR yes 70672087
chr5 80217057 80217078 REST JASPAR yes 63736986
chr5 80217057 80217078 REST JASPAR yes 70672088
chr5 80217058 80217077 REST JASPAR yes 63736987
chr5 80217058 80217077 REST JASPAR yes 70672089
chr5 80217068 80217073 GATA2 JASPAR yes 63736988
chr5 80217068 80217073 GATA2 JASPAR yes 70672090
chr5 80217068 80217078 NFKB1 JASPAR yes 63736989
chr5 80217068 80217078 NFKB1 JASPAR yes 70672091
chr5 80217072 80217086 EBF1 JASPAR yes 63736990
chr5 80217072 80217086 EBF1 JASPAR yes 70672092
chr5 80217073 80217084 EBF1 JASPAR yes 63736991
chr5 80217073 80217084 EBF1 JASPAR yes 70672093
chr5 80217085 80217106 REST JASPAR yes 63736992
chr5 80217085 80217106 REST JASPAR yes 70672094
chr5 80217086 80217097 FOXH1 JASPAR yes 63736993
chr5 80217086 80217097 FOXH1 JASPAR yes 70672095
chr5 80217116 80217132 POU4F2 JASPAR yes 63736994
chr5 80217116 80217132 POU4F2 JASPAR yes 70672096
chr5 80217121 80217125 YY1 TRANSFAC yes 63736995
chr5 80217121 80217125 YY1 TRANSFAC yes 70672097
chr5 80217125 80217138 SMAD2 JASPAR yes 63736996
chr5 80217125 80217138 SMAD2 JASPAR yes 70672098
chr5 80217143 80217158 FOXP1 JASPAR yes 63736997
chr5 80217143 80217158 FOXP1 JASPAR yes 70672099
chr5 80217145 80217160 MEF2A JASPAR yes 63736998
chr5 80217145 80217160 MEF2A JASPAR yes 70672100
chr5 80217146 80217161 MEF2C JASPAR yes 63736999
chr5 80217146 80217161 MEF2C JASPAR yes 70672101
SNP sites on vista48224[chr5:80216788-80217158]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 80216862 rs141259332 G A
HNF4A HNF4G LFA1 NR2C2 NR2F1 RXRB RXRG
8339482
chr5 80216908 rs183533793 G A
REST
8339483
chr5 80216933 rs6882823 T C
REST TBX20
8339484
chr5 80217054 rs150760514 A G
HNF4A HNF4G NR2F1 REST
8339485
chr5 80217130 rs10079494 G A
POU4F2 REST SMAD2
8339486
Genes possibly regulated by vista48224[chr5:80216788-80217158]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 80256491 80525975 + RASGRF2 ENSG00000113319.7 80256491 0.87 0.93 5504 60667
Expression level of Genes
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miRNAs possibly regulated by vista48224[chr5:80216788-80217158]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results