EnhancerDB
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  3. vista48230[chr5:80316439-80316828]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48230[chr5:80316439-80316828]
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Tissue distribution of vista48230
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Transcription factor that possibly regulate vista48230[chr5:80316439-80316828]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 80316439 80316460 ZNF263 JASPAR yes 70672303
chr5 80316468 80316483 HSF1 JASPAR yes 70672304
chr5 80316473 80316488 HSF1 JASPAR yes 70672305
chr5 80316474 80316489 TFAP2C JASPAR yes 70672306
chr5 80316477 80316488 EBF1 JASPAR yes 70672307
chr5 80316507 80316518 DMRT3 JASPAR yes 70672308
chr5 80316514 80316518 YY1 TRANSFAC yes 70672309
chr5 80316521 80316535 JUN JASPAR yes 70672310
chr5 80316522 80316534 PKNOX1 JASPAR yes 70672311
chr5 80316522 80316534 TGIF1 JASPAR yes 70672312
chr5 80316522 80316534 TGIF2 JASPAR yes 70672313
chr5 80316523 80316534 BATF JASPAR yes 70672314
chr5 80316524 80316535 FOSL2 JASPAR yes 70672315
chr5 80316524 80316535 JUNB JASPAR yes 70672316
chr5 80316525 80316536 FOS JASPAR yes 70672317
chr5 80316525 80316536 FOSL1 JASPAR yes 70672318
chr5 80316525 80316536 JUND JASPAR yes 70672319
chr5 80316526 80316535 JDP2 JASPAR yes 70672320
chr5 80316526 80316537 JUNB JASPAR yes 70672321
chr5 80316526 80316540 JUN JASPAR yes 70672322
chr5 80316527 80316534 JUN TRANSFAC yes 70672323
chr5 80316527 80316538 BATF JASPAR yes 70672324
chr5 80316578 80316583 ETS2 TRANSFAC yes 70672325
chr5 80316581 80316595 ONECUT2 JASPAR yes 70672326
chr5 80316581 80316595 ONECUT3 JASPAR yes 70672327
chr5 80316582 80316594 IRF1 JASPAR yes 70672328
chr5 80316589 80316599 OLIG3 JASPAR yes 70672329
chr5 80316602 80316608 SOX10 JASPAR yes 70672330
chr5 80316632 80316644 TGIF1 JASPAR yes 70672331
chr5 80316632 80316644 TGIF2 JASPAR yes 70672332
chr5 80316633 80316643 MYF6 JASPAR yes 70672333
chr5 80316633 80316643 NEUROG2 JASPAR yes 70672334
chr5 80316635 80316639 YY1 TRANSFAC yes 70672335
chr5 80316641 80316649 ISL2 JASPAR yes 70672336
chr5 80316641 80316650 NKX3-2 JASPAR yes 70672337
chr5 80316652 80316667 RFX5 JASPAR yes 70672338
chr5 80316654 80316667 SMAD2 JASPAR yes 70672339
chr5 80316696 80316703 NKX3-1 JASPAR yes 70672340
chr5 80316697 80316705 FOXC1 JASPAR yes 70672341
chr5 80316713 80316717 YY1 TRANSFAC yes 70672342
chr5 80316727 80316737 RELA JASPAR yes 70672343
chr5 80316741 80316755 SPI1 JASPAR yes 70672344
chr5 80316741 80316755 SPIC JASPAR yes 70672345
chr5 80316753 80316756 MYB TRANSFAC yes 70672346
chr5 80316772 80316775 MYB TRANSFAC yes 70672347
chr5 80316779 80316798 CTCF JASPAR yes 70672348
chr5 80316781 80316800 CTCF JASPAR yes 70672349
chr5 80316783 80316793 FIGLA JASPAR yes 70672350
chr5 80316783 80316793 TCF3 JASPAR yes 70672351
chr5 80316785 80316790 USF2 TRANSFAC yes 70672352
chr5 80316802 80316822 TBX19 JASPAR yes 70672353
chr5 80316804 80316820 T JASPAR yes 70672354
SNP sites on vista48230[chr5:80316439-80316828]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 80316479 rs189161867 G C
EBF1 HSF1 TFAP2C
8340435
chr5 80316615 rs74964930 A G no 8340436
chr5 80316686 rs476036 A G no 8340437
chr5 80316687 rs184212909 G A no 8340438
Genes possibly regulated by vista48230[chr5:80316439-80316828]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 80256491 80525975 + RASGRF2 ENSG00000113319.7 80256491 0.87 0.93 5504 40052
Expression level of Genes
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miRNAs possibly regulated by vista48230[chr5:80316439-80316828]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results