EnhancerDB
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  3. vista48235[chr5:80484765-80484917]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48235[chr5:80484765-80484917]
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Tissue distribution of vista48235
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Transcription factor that possibly regulate vista48235[chr5:80484765-80484917]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 80484771 80484781 MAX JASPAR yes 63756063
chr5 80484771 80484781 MAX JASPAR yes 70672414
chr5 80484771 80484783 HES5 JASPAR yes 63756064
chr5 80484771 80484783 PKNOX2 JASPAR yes 63756065
chr5 80484771 80484783 TGIF1 JASPAR yes 63756066
chr5 80484771 80484783 TGIF2 JASPAR yes 63756067
chr5 80484771 80484783 HES5 JASPAR yes 70672415
chr5 80484771 80484783 PKNOX2 JASPAR yes 70672416
chr5 80484771 80484783 TGIF1 JASPAR yes 70672417
chr5 80484771 80484783 TGIF2 JASPAR yes 70672418
chr5 80484782 80484797 SOX21 JASPAR yes 63756068
chr5 80484782 80484797 SOX21 JASPAR yes 70672419
chr5 80484782 80484798 SOX4 JASPAR yes 63756069
chr5 80484782 80484798 SOX4 JASPAR yes 70672420
chr5 80484787 80484793 NFIC JASPAR yes 63756070
chr5 80484787 80484793 NFIC JASPAR yes 70672421
chr5 80484789 80484793 H1TF2 TRANSFAC yes 63756071
chr5 80484789 80484793 NFE TRANSFAC yes 63756072
chr5 80484789 80484793 SRF TRANSFAC yes 63756073
chr5 80484789 80484793 H1TF2 TRANSFAC yes 70672422
chr5 80484789 80484793 NFE TRANSFAC yes 70672423
chr5 80484789 80484793 SRF TRANSFAC yes 70672424
chr5 80484792 80484807 PRDM1 JASPAR yes 63756074
chr5 80484792 80484807 PRDM1 JASPAR yes 70672425
chr5 80484815 80484820 ETS2 TRANSFAC yes 63756075
chr5 80484815 80484820 ETS2 TRANSFAC yes 70672426
chr5 80484828 80484842 RXRB JASPAR yes 63756076
chr5 80484828 80484842 RXRG JASPAR yes 63756077
chr5 80484828 80484842 RXRB JASPAR yes 70672427
chr5 80484828 80484842 RXRG JASPAR yes 70672428
chr5 80484828 80484843 NR2C2 JASPAR yes 63756078
chr5 80484828 80484843 NR2C2 JASPAR yes 70672429
chr5 80484831 80484844 NR2F1 JASPAR yes 63756079
chr5 80484831 80484844 NR2F1 JASPAR yes 70672430
chr5 80484833 80484844 ESRRA JASPAR yes 63756080
chr5 80484833 80484844 ESRRB JASPAR yes 63756081
chr5 80484833 80484844 ESRRA JASPAR yes 70672431
chr5 80484833 80484844 ESRRB JASPAR yes 70672432
chr5 80484847 80484851 YY1 TRANSFAC yes 63756082
chr5 80484847 80484851 YY1 TRANSFAC yes 70672433
SNP sites on vista48235[chr5:80484765-80484917]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 80484793 rs75377814 A G
H1TF2 NFE NFIC PRDM1 SOX21 SOX4 SRF
8341357
chr5 80484901 rs530463231 G GTGCT no 8341358
Genes possibly regulated by vista48235[chr5:80484765-80484917]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 80529104 80562216 + CKMT2 ENSG00000131730.11 80529104 0.99 1.0 5505 55813
Expression level of Genes
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miRNAs possibly regulated by vista48235[chr5:80484765-80484917]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results