EnhancerDB
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  3. vista48237[chr5:80551638-80551938]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48237[chr5:80551638-80551938]
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Tissue distribution of vista48237
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Transcription factor that possibly regulate vista48237[chr5:80551638-80551938]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 80551638 80551653 FOXP1 JASPAR yes 70672481
chr5 80551639 80551645 TBP TRANSFAC yes 70672482
chr5 80551639 80551654 FOXP1 JASPAR yes 70672483
chr5 80551639 80551660 IRF1 JASPAR yes 70672484
chr5 80551640 80551655 FOXP1 JASPAR yes 70672485
chr5 80551645 80551666 IRF1 JASPAR yes 70672486
chr5 80551646 80551667 IRF1 JASPAR yes 70672487
chr5 80551672 80551676 YY1 TRANSFAC yes 70672488
chr5 80551673 80551684 CEBPA JASPAR yes 70672489
chr5 80551680 80551692 POU2F1 JASPAR yes 70672490
chr5 80551680 80551693 POU3F3 JASPAR yes 70672491
chr5 80551680 80551694 POU1F1 JASPAR yes 70672492
chr5 80551681 80551693 POU3F1 JASPAR yes 70672493
chr5 80551681 80551693 POU3F2 JASPAR yes 70672494
chr5 80551681 80551694 POU2F2 JASPAR yes 70672495
chr5 80551682 80551691 POU5F1B JASPAR yes 70672496
chr5 80551683 80551690 POU2F1 TRANSFAC yes 70672497
chr5 80551683 80551690 POU2F2 TRANSFAC yes 70672498
chr5 80551707 80551711 YY1 TRANSFAC yes 70672499
chr5 80551745 80551757 TEF JASPAR yes 70672500
chr5 80551749 80551767 NR3C1 JASPAR yes 70672501
chr5 80551798 80551816 NR3C1 JASPAR yes 70672502
chr5 80551799 80551814 AR JASPAR yes 70672503
chr5 80551799 80551816 NR3C1 JASPAR yes 70672504
chr5 80551799 80551816 NR3C2 JASPAR yes 70672505
chr5 80551816 80551820 LFA1 TRANSFAC yes 70672506
chr5 80551824 80551842 ESR2 JASPAR yes 70672507
chr5 80551826 80551841 ESR2 JASPAR yes 70672508
chr5 80551827 80551831 ESR1 TRANSFAC yes 70672509
chr5 80551849 80551864 LEF1 JASPAR yes 70672510
chr5 80551855 80551873 ESR1 JASPAR yes 70672511
chr5 80551864 80551873 NKX3-2 JASPAR yes 70672512
chr5 80551890 80551896 MZF1 JASPAR yes 70672513
chr5 80551897 80551903 ZNF354C JASPAR yes 70672514
chr5 80551907 80551913 MYC TRANSFAC yes 70672515
chr5 80551920 80551931 PROP1 JASPAR yes 70672516
chr5 80551924 80551938 POU1F1 JASPAR yes 70672517
chr5 80551925 80551937 POU3F1 JASPAR yes 70672518
chr5 80551925 80551937 POU3F2 JASPAR yes 70672519
chr5 80551925 80551938 POU3F3 JASPAR yes 70672520
chr5 80551926 80551930 YY1 TRANSFAC yes 70672521
chr5 80551926 80551938 POU2F1 JASPAR yes 70672522
chr5 80551927 80551936 POU3F4 JASPAR yes 70672523
chr5 80551927 80551936 POU5F1B JASPAR yes 70672524
SNP sites on vista48237[chr5:80551638-80551938]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 80551640 rs111676795 T TA
FOXP1 IRF1 TBP
8341714
chr5 80551640 rs544336247 TAAAAA T
FOXP1 IRF1 TBP
8341715
chr5 80551640 rs562524204 T TA
FOXP1 IRF1 TBP
8341716
chr5 80551871 rs140782951 T TA
ESR1 NKX3-2
8341717
chr5 80551905 rs551853333 T C no 8341718
chr5 80551916 rs10514215 G C no 8341719
Genes possibly regulated by vista48237[chr5:80551638-80551938]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 80529104 80562216 + CKMT2 ENSG00000131730.11 80529104 0.99 1.0 5505 77466
chr5 80597409 80609116 + ZCCHC9 ENSG00000131732.7 80597409 0.75 0.99 5506 54529
Expression level of Genes
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miRNAs possibly regulated by vista48237[chr5:80551638-80551938]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results