EnhancerDB
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  3. vista48250[chr5:81081275-81081428]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48250[chr5:81081275-81081428]
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Tissue distribution of vista48250
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Transcription factor that possibly regulate vista48250[chr5:81081275-81081428]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 81081163 81081480 CTCF UCSC Txn Factor no Conserved 108535575
chr5 81081258 81081276 NR3C1 JASPAR yes 63790416
chr5 81081258 81081276 NR3C1 JASPAR yes 70673070
chr5 81081270 81081285 FOXP1 JASPAR yes 63790418
chr5 81081270 81081285 FOXP1 JASPAR yes 70673071
chr5 81081284 81081290 YY1 JASPAR yes 63790419
chr5 81081284 81081290 YY1 JASPAR yes 70673072
chr5 81081286 81081305 CTCF JASPAR yes 63790420
chr5 81081286 81081305 CTCF JASPAR yes 70673073
chr5 81081292 81081304 YY1 JASPAR yes 63790421
chr5 81081292 81081304 YY1 JASPAR yes 70673074
chr5 81081295 81081301 YY1 JASPAR yes 63790422
chr5 81081295 81081301 YY1 JASPAR yes 70673075
chr5 81081302 81081306 YY1 TRANSFAC yes 63790423
chr5 81081302 81081306 YY1 TRANSFAC yes 70673076
chr5 81081307 81081310 MYB TRANSFAC yes 63790424
chr5 81081307 81081310 MYB TRANSFAC yes 70673077
chr5 81081307 81081324 RARA JASPAR yes 63790425
chr5 81081307 81081324 RXRA JASPAR yes 63790426
chr5 81081307 81081324 RARA JASPAR yes 70673078
chr5 81081307 81081324 RXRA JASPAR yes 70673079
chr5 81081314 81081323 CDX1 JASPAR yes 63790427
chr5 81081314 81081323 CDX1 JASPAR yes 70673080
chr5 81081326 81081344 NR3C1 JASPAR yes 63790428
chr5 81081326 81081344 NR3C1 JASPAR yes 70673081
chr5 81081329 81081340 BATF JASPAR yes 63790429
chr5 81081329 81081340 BATF JASPAR yes 70673082
chr5 81081331 81081342 NFE2 JASPAR yes 63790430
chr5 81081331 81081342 NFE2 JASPAR yes 70673083
chr5 81081332 81081341 JDP2 JASPAR yes 63790431
chr5 81081332 81081341 JDP2 JASPAR yes 70673084
chr5 81081336 81081347 ELF5 JASPAR yes 63790432
chr5 81081336 81081347 ELF5 JASPAR yes 70673085
chr5 81081336 81081349 ELF1 JASPAR yes 63790433
chr5 81081336 81081349 ELF1 JASPAR yes 70673086
chr5 81081344 81081354 HMBOX1 JASPAR yes 63790434
chr5 81081344 81081354 HMBOX1 JASPAR yes 70673087
chr5 81081346 81081349 MYB TRANSFAC yes 63790435
chr5 81081346 81081349 MYB TRANSFAC yes 70673088
chr5 81081349 81081353 H1TF2 TRANSFAC yes 63790436
chr5 81081349 81081353 NFE TRANSFAC yes 63790437
chr5 81081349 81081353 SRF TRANSFAC yes 63790438
chr5 81081349 81081353 H1TF2 TRANSFAC yes 70673089
chr5 81081349 81081353 NFE TRANSFAC yes 70673090
chr5 81081349 81081353 SRF TRANSFAC yes 70673091
chr5 81081349 81081355 NFYC TRANSFAC yes 63790439
chr5 81081349 81081355 NFYC TRANSFAC yes 70673092
chr5 81081357 81081371 ONECUT3 JASPAR yes 63790440
chr5 81081357 81081371 ONECUT3 JASPAR yes 70673093
chr5 81081359 81081368 SRY JASPAR yes 63790441
chr5 81081359 81081368 SRY JASPAR yes 70673094
chr5 81081369 81081380 RUNX1 JASPAR yes 63790442
chr5 81081369 81081380 RUNX1 JASPAR yes 70673095
chr5 81081384 81081403 RFX2 JASPAR yes 63790443
chr5 81081384 81081403 RFX2 JASPAR yes 70673096
chr5 81081388 81081404 RFX2 JASPAR yes 63790444
chr5 81081388 81081404 RFX4 JASPAR yes 63790445
chr5 81081388 81081404 RFX5 JASPAR yes 63790446
chr5 81081388 81081404 RFX2 JASPAR yes 70673097
chr5 81081388 81081404 RFX4 JASPAR yes 70673098
chr5 81081388 81081404 RFX5 JASPAR yes 70673099
chr5 81081398 81081414 SOX8 JASPAR yes 63790447
chr5 81081398 81081414 SOX8 JASPAR yes 70673100
chr5 81081408 81081418 HOXA13 JASPAR yes 63790448
chr5 81081408 81081418 HOXB13 JASPAR yes 63790449
chr5 81081408 81081418 HOXD13 JASPAR yes 63790450
chr5 81081408 81081418 HOXA13 JASPAR yes 70673101
chr5 81081408 81081418 HOXB13 JASPAR yes 70673102
chr5 81081408 81081418 HOXD13 JASPAR yes 70673103
chr5 81081408 81081419 HOXA10 JASPAR yes 63790451
chr5 81081408 81081419 HOXA10 JASPAR yes 70673104
chr5 81081409 81081418 CDX1 JASPAR yes 63790452
chr5 81081409 81081418 CDX1 JASPAR yes 70673105
chr5 81081409 81081420 CDX2 JASPAR yes 63790453
chr5 81081409 81081420 CDX2 JASPAR yes 70673106
chr5 81081420 81081434 SPI1 JASPAR yes 63790454
chr5 81081420 81081434 SPI1 JASPAR yes 70673107
SNP sites on vista48250[chr5:81081275-81081428]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 81081285 rs554203568 G T
CTCF FOXP1 YY1
8344009
chr5 81081298 rs80047977 T C
CTCF YY1
8344010
chr5 81081415 rs376708186 T C
CDX1 CDX2 CTCF HOXA10 HOXA13 HOXB13 HOXD13
8344011
Genes possibly regulated by vista48250[chr5:81081275-81081428]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 80708840 81047616 - SSBP2 ENSG00000145687.11 81047616 0.89 0.97 5508 66341
Expression level of Genes
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miRNAs possibly regulated by vista48250[chr5:81081275-81081428]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results