EnhancerDB
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  3. vista48277[chr5:82339174-82339396]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48277[chr5:82339174-82339396]
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Tissue distribution of vista48277
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Transcription factor that possibly regulate vista48277[chr5:82339174-82339396]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 82339174 82339189 FOXP1 JASPAR yes 70674395
chr5 82339174 82339195 IRF1 JASPAR yes 70674396
chr5 82339175 82339190 FOXP1 JASPAR yes 70674397
chr5 82339175 82339196 IRF1 JASPAR yes 70674398
chr5 82339176 82339191 FOXP1 JASPAR yes 70674399
chr5 82339176 82339197 IRF1 JASPAR yes 70674400
chr5 82339177 82339192 FOXP1 JASPAR yes 70674401
chr5 82339177 82339198 IRF1 JASPAR yes 70674402
chr5 82339178 82339193 FOXP1 JASPAR yes 70674403
chr5 82339179 82339194 FOXP1 JASPAR yes 70674404
chr5 82339180 82339195 FOXP1 JASPAR yes 70674405
chr5 82339181 82339196 FOXP1 JASPAR yes 70674406
chr5 82339182 82339197 FOXP1 JASPAR yes 70674407
chr5 82339183 82339198 FOXP1 JASPAR yes 70674408
chr5 82339224 82339239 PRDM1 JASPAR yes 70674409
chr5 82339233 82339237 NFE TRANSFAC yes 70674410
chr5 82339254 82339265 CEBPA JASPAR yes 70674411
chr5 82339255 82339266 CEBPB JASPAR yes 70674412
chr5 82339270 82339273 MYB TRANSFAC yes 70674413
chr5 82339270 82339281 RUNX1 JASPAR yes 70674414
chr5 82339318 82339334 RFX2 JASPAR yes 70674415
chr5 82339318 82339334 RFX3 JASPAR yes 70674416
chr5 82339318 82339334 RFX4 JASPAR yes 70674417
chr5 82339333 82339345 HES5 JASPAR yes 70674418
chr5 82339333 82339345 HES7 JASPAR yes 70674419
chr5 82339333 82339345 PKNOX2 JASPAR yes 70674420
chr5 82339333 82339353 TP63 JASPAR yes 70674421
chr5 82339334 82339352 TP73 JASPAR yes 70674422
chr5 82339344 82339354 SP1 JASPAR yes 70674423
chr5 82339347 82339352 SP1 TRANSFAC yes 70674424
chr5 82339353 82339374 IRF1 JASPAR yes 70674425
chr5 82339357 82339378 IRF1 JASPAR yes 70674426
chr5 82339358 82339373 FOXP1 JASPAR yes 70674427
chr5 82339358 82339379 IRF1 JASPAR yes 70674428
chr5 82339359 82339374 FOXP1 JASPAR yes 70674429
chr5 82339359 82339380 IRF1 JASPAR yes 70674430
chr5 82339363 82339384 IRF1 JASPAR yes 70674431
chr5 82339364 82339379 FOXP1 JASPAR yes 70674432
chr5 82339364 82339385 IRF1 JASPAR yes 70674433
chr5 82339365 82339380 STAT2 JASPAR yes 70674434
chr5 82339368 82339389 IRF1 JASPAR yes 70674435
chr5 82339369 82339384 FOXP1 JASPAR yes 70674436
chr5 82339369 82339390 IRF1 JASPAR yes 70674437
chr5 82339373 82339394 IRF1 JASPAR yes 70674438
chr5 82339374 82339389 FOXP1 JASPAR yes 70674439
chr5 82339374 82339395 IRF1 JASPAR yes 70674440
chr5 82339375 82339396 IRF1 JASPAR yes 70674441
chr5 82339376 82339391 FOXP1 JASPAR yes 70674442
chr5 82339378 82339393 FOXP1 JASPAR yes 70674443
chr5 82339379 82339394 FOXP1 JASPAR yes 70674444
chr5 82339380 82339395 FOXP1 JASPAR yes 70674445
chr5 82339381 82339396 FOXP1 JASPAR yes 70674446
SNP sites on vista48277[chr5:82339174-82339396]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 82339197 rs561506578 T C
FOXP1 IRF1
8350039
chr5 82339379 rs112868447 C CT
FOXP1 IRF1 STAT2
8350040
chr5 82339379 rs35410782 C CT
FOXP1 IRF1 STAT2
8350041
Genes possibly regulated by vista48277[chr5:82339174-82339396]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 82348665 82373682 - TMEM167A ENSG00000174695.5 82373682 0.77 0.99 5512 65714
chr5 82373317 82649606 + XRCC4 ENSG00000152422.11 82373317 0.8 0.99 5513 66079
Expression level of Genes
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miRNAs possibly regulated by vista48277[chr5:82339174-82339396]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results