EnhancerDB
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  3. vista4828[chr1:207509006-207509478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4828[chr1:207509006-207509478]
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Tissue distribution of vista4828
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Transcription factor that possibly regulate vista4828[chr1:207509006-207509478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 207507462 207510971 POLR2A UCSC Txn Factor no Conserved 107864512
chr1 207508992 207509329 CEBPB UCSC Txn Factor no Conserved 107864523
chr1 207509000 207509344 STAT3 UCSC Txn Factor no Conserved 107864525
chr1 207509049 207509273 FOS UCSC Txn Factor no Conserved 107864533
chr1 207509340 207509706 EBF1 UCSC Txn Factor no Conserved 107864544
chr1 207509379 207509622 SPI1 UCSC Txn Factor no Conserved 107864547
chr1 207508997 207509007 BARHL2 JASPAR yes 34857988
chr1 207508997 207509007 BARHL2 JASPAR yes 118445600
chr1 207509034 207509039 GATA2 JASPAR yes 34857989
chr1 207509034 207509039 GATA2 JASPAR yes 118445601
chr1 207509055 207509061 GATA3 JASPAR yes 34857990
chr1 207509055 207509061 GATA3 JASPAR yes 118445602
chr1 207509070 207509088 NR3C1 JASPAR yes 34857991
chr1 207509070 207509088 NR3C1 JASPAR yes 118445603
chr1 207509094 207509109 RFX5 JASPAR yes 34857992
chr1 207509094 207509109 RFX5 JASPAR yes 118445604
chr1 207509104 207509108 LFA1 TRANSFAC yes 34857993
chr1 207509104 207509108 LFA1 TRANSFAC yes 118445605
chr1 207509141 207509156 JUND JASPAR yes 34857994
chr1 207509141 207509156 JUND JASPAR yes 118445606
chr1 207509142 207509155 JUN JASPAR yes 34857995
chr1 207509142 207509155 JUN JASPAR yes 118445607
chr1 207509143 207509156 ATF4 JASPAR yes 34857996
chr1 207509143 207509156 ATF4 JASPAR yes 118445608
chr1 207509143 207509157 ATF7 JASPAR yes 34857997
chr1 207509143 207509157 ATF7 JASPAR yes 118445609
chr1 207509144 207509156 DBP JASPAR yes 34857998
chr1 207509144 207509156 HLF JASPAR yes 34857999
chr1 207509144 207509156 JDP2 JASPAR yes 34858000
chr1 207509144 207509156 TEF JASPAR yes 34858001
chr1 207509144 207509156 DBP JASPAR yes 118445610
chr1 207509144 207509156 HLF JASPAR yes 118445611
chr1 207509144 207509156 JDP2 JASPAR yes 118445612
chr1 207509144 207509156 TEF JASPAR yes 118445613
chr1 207509145 207509156 CEBPB JASPAR yes 34858002
chr1 207509145 207509156 CEBPB JASPAR yes 118445614
chr1 207509145 207509158 DUXA JASPAR yes 34858003
chr1 207509145 207509158 DUXA JASPAR yes 118445615
chr1 207509146 207509157 NFIL3 JASPAR yes 34858004
chr1 207509146 207509157 NFIL3 JASPAR yes 118445616
chr1 207509156 207509171 TFAP2C JASPAR yes 34858005
chr1 207509156 207509171 TFAP2C JASPAR yes 118445617
chr1 207509188 207509199 PHOX2A JASPAR yes 34858006
chr1 207509188 207509199 PHOX2A JASPAR yes 118445618
chr1 207509197 207509201 YY1 TRANSFAC yes 34858007
chr1 207509197 207509201 YY1 TRANSFAC yes 118445619
chr1 207509197 207509212 STAT1 JASPAR yes 34858008
chr1 207509197 207509212 STAT1 JASPAR yes 118445620
chr1 207509204 207509213 PITX3 JASPAR yes 34858009
chr1 207509204 207509213 PITX3 JASPAR yes 118445621
chr1 207509204 207509214 GSC2 JASPAR yes 34858010
chr1 207509204 207509214 GSC JASPAR yes 34858011
chr1 207509204 207509214 GSC2 JASPAR yes 118445622
chr1 207509204 207509214 GSC JASPAR yes 118445623
chr1 207509205 207509213 OTX1 JASPAR yes 34858012
chr1 207509205 207509213 OTX2 JASPAR yes 34858013
chr1 207509205 207509213 OTX1 JASPAR yes 118445624
chr1 207509205 207509213 OTX2 JASPAR yes 118445625
chr1 207509210 207509218 EHF JASPAR yes 34858014
chr1 207509210 207509218 EHF JASPAR yes 118445626
chr1 207509221 207509231 MEOX1 JASPAR yes 118445627
chr1 207509221 207509231 MEOX2 JASPAR yes 118445628
chr1 207509221 207509231 POU6F1 JASPAR yes 118445629
chr1 207509225 207509235 CEBPB JASPAR yes 118445630
chr1 207509225 207509235 CEBPG JASPAR yes 118445631
chr1 207509228 207509243 AR JASPAR yes 118445632
chr1 207509247 207509252 GATA2 JASPAR yes 118445633
chr1 207509253 207509257 YY1 TRANSFAC yes 118445634
chr1 207509260 207509273 JUN JASPAR yes 118445635
chr1 207509316 207509327 CEBPB JASPAR yes 118445636
chr1 207509342 207509346 H1TF2 TRANSFAC yes 118445637
chr1 207509342 207509346 NFE TRANSFAC yes 118445638
chr1 207509342 207509346 SRF TRANSFAC yes 118445639
chr1 207509364 207509370 LEF1 TRANSFAC yes 118445640
chr1 207509364 207509370 SOX10 JASPAR yes 118445641
chr1 207509369 207509373 TEAD2 TRANSFAC yes 118445642
chr1 207509379 207509383 H1TF2 TRANSFAC yes 118445643
chr1 207509379 207509383 NFE TRANSFAC yes 118445644
chr1 207509379 207509383 SRF TRANSFAC yes 118445645
chr1 207509386 207509391 MYC TRANSFAC yes 118445646
chr1 207509399 207509415 SOX4 JASPAR yes 118445647
chr1 207509433 207509453 TP53 JASPAR yes 118445648
chr1 207509440 207509450 OLIG2 JASPAR yes 118445649
chr1 207509440 207509450 OLIG3 JASPAR yes 118445650
chr1 207509454 207509460 TCF4 TRANSFAC yes 118445651
chr1 207509464 207509469 USF2 TRANSFAC yes 118445652
SNP sites on vista4828[chr1:207509006-207509478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 207509022 rs7544288 G A
CEBPB POLR2A STAT3
894345
chr1 207509234 rs551748567 A G
AR CEBPB CEBPG FOS POLR2A STAT3
894346
chr1 207509287 rs28371666 G A
CEBPB POLR2A STAT3
894347
chr1 207509328 rs12743913 A G
CEBPB POLR2A STAT3
894348
chr1 207509358 rs372689910 CA C
EBF1 POLR2A
894349
chr1 207509365 rs1507760 C T
EBF1 LEF1 POLR2A SOX10
894350
Genes possibly regulated by vista4828[chr1:207509006-207509478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 207494853 207534311 + CD55 ENSG00000196352.9 207494853 0.88 1.0 1798 85847
Expression level of Genes
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miRNAs possibly regulated by vista4828[chr1:207509006-207509478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results