EnhancerDB
  1. Home
  2. Enhancers
  3. vista48288[chr5:82670509-82670662]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48288[chr5:82670509-82670662]
Back to top
Tissue distribution of vista48288
Back to top
Transcription factor that possibly regulate vista48288[chr5:82670509-82670662]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 82670534 82670545 HOXA10 JASPAR yes 70674861
chr5 82670535 82670544 CDX1 JASPAR yes 70674862
chr5 82670535 82670546 CDX2 JASPAR yes 70674863
chr5 82670543 82670547 YY1 TRANSFAC yes 70674864
chr5 82670547 82670565 MAFF JASPAR yes 70674865
chr5 82670549 82670560 NRL JASPAR yes 70674866
chr5 82670549 82670564 MAFK JASPAR yes 70674867
chr5 82670549 82670570 MAFG JASPAR yes 70674868
chr5 82670569 82670578 NKX2-8 JASPAR yes 70674869
chr5 82670569 82670579 NKX2-3 JASPAR yes 70674870
chr5 82670577 82670588 CEBPB JASPAR yes 70674871
chr5 82670578 82670588 CEBPB JASPAR yes 70674872
chr5 82670578 82670588 CEBPE JASPAR yes 70674873
chr5 82670578 82670588 CEBPG JASPAR yes 70674874
chr5 82670578 82670589 CEBPA JASPAR yes 70674875
chr5 82670595 82670603 CREB1 JASPAR yes 70674876
chr5 82670596 82670608 CREB1 JASPAR yes 70674877
chr5 82670597 82670602 ATF1 TRANSFAC yes 70674878
chr5 82670607 82670611 NFE TRANSFAC yes 70674879
chr5 82670611 82670615 YY1 TRANSFAC yes 70674880
chr5 82670614 82670620 TCF1 TRANSFAC yes 70674881
chr5 82670625 82670636 TBX20 JASPAR yes 70674882
chr5 82670651 82670655 YY1 TRANSFAC yes 70674883
SNP sites on vista48288[chr5:82670509-82670662]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 82670535 rs372735320 G C,T
CDX1 CDX2 HOXA10
8351048
Genes possibly regulated by vista48288[chr5:82670509-82670662]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 82767284 82878122 + VCAN ENSG00000038427.11 82767284 0.91 0.99 5514 3378
Expression level of Genes
Back to top
miRNAs possibly regulated by vista48288[chr5:82670509-82670662]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results