EnhancerDB
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  3. vista48293[chr5:82696125-82696357]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48293[chr5:82696125-82696357]
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Tissue distribution of vista48293
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Transcription factor that possibly regulate vista48293[chr5:82696125-82696357]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 82696127 82696145 RARA JASPAR yes 70675036
chr5 82696146 82696162 POU4F2 JASPAR yes 70675037
chr5 82696146 82696162 POU4F3 JASPAR yes 70675038
chr5 82696147 82696163 POU4F2 JASPAR yes 70675039
chr5 82696147 82696163 POU4F3 JASPAR yes 70675040
chr5 82696149 82696153 YY1 TRANSFAC yes 70675041
chr5 82696149 82696163 POU4F1 JASPAR yes 70675042
chr5 82696149 82696164 HNF1A JASPAR yes 70675043
chr5 82696150 82696162 HNF1B JASPAR yes 70675044
chr5 82696150 82696163 HNF1B JASPAR yes 70675045
chr5 82696159 82696162 MYB TRANSFAC yes 70675046
chr5 82696163 82696181 SRF JASPAR yes 70675047
chr5 82696164 82696173 NFIX JASPAR yes 70675048
chr5 82696164 82696174 NFIA JASPAR yes 70675049
chr5 82696165 82696181 SRF JASPAR yes 70675050
chr5 82696165 82696183 SRF JASPAR yes 70675051
chr5 82696166 82696172 NFIC JASPAR yes 70675052
chr5 82696166 82696178 SRF JASPAR yes 70675053
chr5 82696168 82696180 SRF JASPAR yes 70675054
chr5 82696190 82696194 YY1 TRANSFAC yes 70675055
chr5 82696191 82696204 POU3F3 JASPAR yes 70675056
chr5 82696194 82696206 BHLHE23 JASPAR yes 70675057
chr5 82696195 82696205 OLIG2 JASPAR yes 70675058
chr5 82696195 82696205 OLIG3 JASPAR yes 70675059
chr5 82696199 82696203 YY1 TRANSFAC yes 70675060
chr5 82696203 82696216 EOMES JASPAR yes 70675061
chr5 82696221 82696225 TEAD2 TRANSFAC yes 70675062
chr5 82696221 82696226 TBP TRANSFAC yes 70675063
chr5 82696221 82696227 TMF TRANSFAC yes 70675064
chr5 82696223 82696233 TEAD1 JASPAR yes 70675065
chr5 82696223 82696233 TEAD4 JASPAR yes 70675066
chr5 82696229 82696249 RREB1 JASPAR yes 70675067
chr5 82696256 82696267 DUX4 JASPAR yes 70675068
chr5 82696269 82696273 YY1 TRANSFAC yes 70675069
chr5 82696278 82696296 MAFF JASPAR yes 70675070
chr5 82696280 82696291 NRL JASPAR yes 70675071
chr5 82696280 82696295 MAFK JASPAR yes 70675072
chr5 82696292 82696302 RELA JASPAR yes 70675073
chr5 82696292 82696302 REL JASPAR yes 70675074
chr5 82696292 82696303 NFKB1 JASPAR yes 70675075
chr5 82696295 82696305 NFATC3 JASPAR yes 70675076
chr5 82696299 82696309 ALX3 JASPAR yes 70675077
chr5 82696300 82696304 H1TF2 TRANSFAC yes 70675078
chr5 82696300 82696304 NFE TRANSFAC yes 70675079
chr5 82696300 82696304 SRF TRANSFAC yes 70675080
chr5 82696300 82696308 DLX6 JASPAR yes 70675081
chr5 82696300 82696308 MSX2 JASPAR yes 70675082
chr5 82696305 82696309 TEAD2 TRANSFAC yes 70675083
chr5 82696307 82696310 MYB TRANSFAC yes 70675084
chr5 82696319 82696324 MYB TRANSFAC yes 70675085
SNP sites on vista48293[chr5:82696125-82696357]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 82696207 rs572220397 G T
EOMES
8351199
chr5 82696327 rs199616545 TA T no 8351200
Genes possibly regulated by vista48293[chr5:82696125-82696357]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 82767284 82878122 + VCAN ENSG00000038427.11 82767284 0.91 0.99 5514 29073
Expression level of Genes
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miRNAs possibly regulated by vista48293[chr5:82696125-82696357]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results