EnhancerDB
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  3. vista4834[chr1:207606927-207607187]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4834[chr1:207606927-207607187]
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Tissue distribution of vista4834
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Transcription factor that possibly regulate vista4834[chr1:207606927-207607187]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 207606932 207606948 SOX8 JASPAR yes 34864455
chr1 207606932 207606948 SOX8 JASPAR yes 118445766
chr1 207606937 207606949 PKNOX2 JASPAR yes 34864456
chr1 207606937 207606949 TGIF2 JASPAR yes 34864457
chr1 207606937 207606949 PKNOX2 JASPAR yes 118445767
chr1 207606937 207606949 TGIF2 JASPAR yes 118445768
chr1 207606944 207606956 PKNOX1 JASPAR yes 34864458
chr1 207606944 207606956 PKNOX2 JASPAR yes 34864459
chr1 207606944 207606956 TGIF1 JASPAR yes 34864460
chr1 207606944 207606956 TGIF2 JASPAR yes 34864461
chr1 207606944 207606956 PKNOX1 JASPAR yes 118445769
chr1 207606944 207606956 PKNOX2 JASPAR yes 118445770
chr1 207606944 207606956 TGIF1 JASPAR yes 118445771
chr1 207606944 207606956 TGIF2 JASPAR yes 118445772
chr1 207606964 207606975 ESRRA JASPAR yes 34864462
chr1 207606964 207606975 ESRRA JASPAR yes 118445773
chr1 207606968 207606972 ESR1 TRANSFAC yes 34864463
chr1 207606968 207606972 ESR1 TRANSFAC yes 118445774
chr1 207607030 207607041 NFKB1 JASPAR yes 34864464
chr1 207607030 207607041 NFKB1 JASPAR yes 118445775
chr1 207607031 207607041 NFKB1 JASPAR yes 34864465
chr1 207607031 207607041 RELA JASPAR yes 34864466
chr1 207607031 207607041 REL JASPAR yes 34864467
chr1 207607031 207607041 NFKB1 JASPAR yes 118445776
chr1 207607031 207607041 RELA JASPAR yes 118445777
chr1 207607031 207607041 REL JASPAR yes 118445778
chr1 207607031 207607042 NFKB1 JASPAR yes 34864468
chr1 207607031 207607042 NFKB1 JASPAR yes 118445779
chr1 207607034 207607044 NFATC3 JASPAR yes 34864469
chr1 207607034 207607044 NFATC3 JASPAR yes 118445780
chr1 207607035 207607042 NFATC2 JASPAR yes 34864470
chr1 207607035 207607042 NFATC2 JASPAR yes 118445781
chr1 207607036 207607047 STAT3 JASPAR yes 34864471
chr1 207607036 207607047 STAT3 JASPAR yes 118445782
chr1 207607070 207607075 GATA2 JASPAR yes 34864472
chr1 207607070 207607075 GATA2 JASPAR yes 118445783
chr1 207607070 207607083 ZBTB18 JASPAR yes 34864473
chr1 207607070 207607083 ZBTB18 JASPAR yes 118445784
chr1 207607082 207607086 NFE TRANSFAC yes 34864474
chr1 207607082 207607086 NFE TRANSFAC yes 118445785
chr1 207607092 207607101 NKX3-2 JASPAR yes 34864475
chr1 207607092 207607101 NKX3-2 JASPAR yes 118445786
chr1 207607098 207607102 YY1 TRANSFAC yes 34864476
chr1 207607098 207607102 YY1 TRANSFAC yes 118445787
chr1 207607102 207607108 TBP TRANSFAC yes 34864477
chr1 207607102 207607108 TBP TRANSFAC yes 118445788
chr1 207607146 207607152 SOX10 JASPAR yes 34864478
chr1 207607146 207607152 SOX10 JASPAR yes 118445789
chr1 207607178 207607182 YY1 TRANSFAC yes 34864479
chr1 207607178 207607182 YY1 TRANSFAC yes 118445790
SNP sites on vista4834[chr1:207606927-207607187]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 207607092 rs17043397 G A
NKX3-2
894911
chr1 207607173 rs372249896 C T no 894912
Genes possibly regulated by vista4834[chr1:207606927-207607187]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 207627575 207663240 + CR2 ENSG00000117322.12 207627575 0.97 1.0 1799 79612
chr1 207669492 207813992 + CR1 ENSG00000203710.6 207669492 0.94 0.98 1800 37695
Expression level of Genes
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miRNAs possibly regulated by vista4834[chr1:207606927-207607187]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results