EnhancerDB
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  3. vista48428[chr5:90349641-90349828]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48428[chr5:90349641-90349828]
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Tissue distribution of vista48428
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Transcription factor that possibly regulate vista48428[chr5:90349641-90349828]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 90349635 90349649 RXRG JASPAR yes 64159156
chr5 90349635 90349649 RXRG JASPAR yes 70681610
chr5 90349635 90349650 NR2C2 JASPAR yes 64159157
chr5 90349635 90349650 NR2C2 JASPAR yes 70681611
chr5 90349659 90349675 POU4F3 JASPAR yes 64159158
chr5 90349659 90349675 POU4F3 JASPAR yes 70681612
chr5 90349661 90349675 POU4F1 JASPAR yes 64159159
chr5 90349661 90349675 POU4F1 JASPAR yes 70681613
chr5 90349717 90349731 POU4F1 JASPAR yes 64159160
chr5 90349717 90349731 POU4F1 JASPAR yes 70681614
chr5 90349717 90349733 POU4F2 JASPAR yes 64159161
chr5 90349717 90349733 POU4F3 JASPAR yes 64159162
chr5 90349717 90349733 POU4F2 JASPAR yes 70681615
chr5 90349717 90349733 POU4F3 JASPAR yes 70681616
chr5 90349726 90349739 POU2F2 JASPAR yes 64159163
chr5 90349726 90349739 POU2F2 JASPAR yes 70681617
chr5 90349728 90349742 POU4F1 JASPAR yes 64159164
chr5 90349728 90349742 POU4F1 JASPAR yes 70681618
chr5 90349728 90349744 POU4F2 JASPAR yes 64159165
chr5 90349728 90349744 POU4F3 JASPAR yes 64159166
chr5 90349728 90349744 POU4F2 JASPAR yes 70681619
chr5 90349728 90349744 POU4F3 JASPAR yes 70681620
chr5 90349739 90349753 POU4F1 JASPAR yes 64159167
chr5 90349739 90349753 POU4F1 JASPAR yes 70681621
chr5 90349739 90349755 POU4F2 JASPAR yes 64159168
chr5 90349739 90349755 POU4F3 JASPAR yes 64159169
chr5 90349739 90349755 POU4F2 JASPAR yes 70681622
chr5 90349739 90349755 POU4F3 JASPAR yes 70681623
chr5 90349740 90349756 POU4F3 JASPAR yes 64159170
chr5 90349740 90349756 POU4F3 JASPAR yes 70681624
chr5 90349742 90349756 POU4F1 JASPAR yes 64159171
chr5 90349742 90349756 POU4F1 JASPAR yes 70681625
chr5 90349743 90349757 POU4F1 JASPAR yes 64159172
chr5 90349743 90349757 POU4F1 JASPAR yes 70681626
chr5 90349743 90349759 POU4F2 JASPAR yes 64159173
chr5 90349743 90349759 POU4F3 JASPAR yes 64159174
chr5 90349743 90349759 POU4F2 JASPAR yes 70681627
chr5 90349743 90349759 POU4F3 JASPAR yes 70681628
chr5 90349779 90349789 RELA JASPAR yes 64159175
chr5 90349779 90349789 REL JASPAR yes 64159176
chr5 90349779 90349789 RELA JASPAR yes 70681629
chr5 90349779 90349789 REL JASPAR yes 70681630
chr5 90349779 90349790 NFKB1 JASPAR yes 64159177
chr5 90349779 90349790 NFKB1 JASPAR yes 70681631
chr5 90349782 90349792 NFATC3 JASPAR yes 64159178
chr5 90349782 90349792 NFATC3 JASPAR yes 70681632
chr5 90349784 90349790 ETS1 JASPAR yes 64159179
chr5 90349784 90349790 ETS1 JASPAR yes 70681633
chr5 90349789 90349798 POU3F4 JASPAR yes 64159180
chr5 90349789 90349798 POU3F4 JASPAR yes 70681634
chr5 90349813 90349825 SRF JASPAR yes 64159181
chr5 90349813 90349825 SRF JASPAR yes 70681635
chr5 90349815 90349819 YY1 TRANSFAC yes 64159182
chr5 90349815 90349819 YY1 TRANSFAC yes 70681636
SNP sites on vista48428[chr5:90349641-90349828]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 90349657 rs370734911 G A no 8371008
chr5 90349666 rs573152214 T C
POU4F1 POU4F3
8371009
chr5 90349672 rs184015092 T A
POU4F1 POU4F3
8371010
chr5 90349714 rs115362537 G A no 8371011
chr5 90349780 rs13357168 T C
NFKB1 REL RELA
8371012
Genes possibly regulated by vista48428[chr5:90349641-90349828]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista48428[chr5:90349641-90349828]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results