EnhancerDB
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  3. vista48429[chr5:90350466-90350674]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48429[chr5:90350466-90350674]
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Tissue distribution of vista48429
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Transcription factor that possibly regulate vista48429[chr5:90350466-90350674]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 90350460 90350468 EHF JASPAR yes 64159278
chr5 90350460 90350468 EHF JASPAR yes 70681637
chr5 90350475 90350479 NFE TRANSFAC yes 64159279
chr5 90350475 90350479 NFE TRANSFAC yes 70681638
chr5 90350488 90350499 HOXC13 JASPAR yes 64159280
chr5 90350488 90350499 HOXC13 JASPAR yes 70681639
chr5 90350492 90350496 TEAD2 TRANSFAC yes 64159281
chr5 90350492 90350496 TEAD2 TRANSFAC yes 70681640
chr5 90350501 90350510 PITX3 JASPAR yes 64159282
chr5 90350501 90350510 PITX3 JASPAR yes 70681641
chr5 90350501 90350511 GSC2 JASPAR yes 64159283
chr5 90350501 90350511 GSC JASPAR yes 64159284
chr5 90350501 90350511 GSC2 JASPAR yes 70681642
chr5 90350501 90350511 GSC JASPAR yes 70681643
chr5 90350502 90350510 OTX1 JASPAR yes 64159285
chr5 90350502 90350510 OTX1 JASPAR yes 70681644
chr5 90350530 90350545 JUND JASPAR yes 64159286
chr5 90350530 90350545 JUND JASPAR yes 70681645
chr5 90350531 90350544 DUXA JASPAR yes 64159287
chr5 90350531 90350544 JUN JASPAR yes 64159288
chr5 90350531 90350544 DUXA JASPAR yes 70681646
chr5 90350531 90350544 JUN JASPAR yes 70681647
chr5 90350531 90350545 RORA JASPAR yes 64159289
chr5 90350531 90350545 RORA JASPAR yes 70681648
chr5 90350532 90350543 DUX4 JASPAR yes 64159290
chr5 90350532 90350543 DUX4 JASPAR yes 70681649
chr5 90350543 90350564 ZNF263 JASPAR yes 64159291
chr5 90350543 90350564 ZNF263 JASPAR yes 70681650
chr5 90350554 90350564 SP1 JASPAR yes 64159292
chr5 90350554 90350564 SP1 JASPAR yes 70681651
chr5 90350555 90350563 EHF JASPAR yes 64159293
chr5 90350555 90350563 EHF JASPAR yes 70681652
chr5 90350588 90350593 H4TF1 TRANSFAC yes 64159294
chr5 90350588 90350593 H4TF1 TRANSFAC yes 70681653
chr5 90350588 90350599 CEBPB JASPAR yes 64159295
chr5 90350588 90350599 CEBPB JASPAR yes 70681654
chr5 90350594 90350606 POU2F1 JASPAR yes 64159296
chr5 90350594 90350606 POU2F1 JASPAR yes 70681655
chr5 90350594 90350607 POU3F3 JASPAR yes 64159297
chr5 90350594 90350607 POU3F3 JASPAR yes 70681656
chr5 90350594 90350608 POU1F1 JASPAR yes 64159298
chr5 90350594 90350608 POU1F1 JASPAR yes 70681657
chr5 90350595 90350607 POU3F1 JASPAR yes 64159299
chr5 90350595 90350607 POU3F2 JASPAR yes 64159300
chr5 90350595 90350607 POU3F1 JASPAR yes 70681658
chr5 90350595 90350607 POU3F2 JASPAR yes 70681659
chr5 90350595 90350608 POU2F2 JASPAR yes 64159301
chr5 90350595 90350608 POU2F2 JASPAR yes 70681660
chr5 90350596 90350605 POU5F1B JASPAR yes 64159302
chr5 90350596 90350605 POU5F1B JASPAR yes 70681661
chr5 90350608 90350613 ETS2 TRANSFAC yes 64159303
chr5 90350608 90350613 ETS2 TRANSFAC yes 70681662
chr5 90350614 90350626 FOXI1 JASPAR yes 64159304
chr5 90350614 90350626 FOXI1 JASPAR yes 70681663
chr5 90350658 90350672 TCF7L2 JASPAR yes 64159305
chr5 90350658 90350672 TCF7L2 JASPAR yes 70681664
chr5 90350662 90350668 TCF1 TRANSFAC yes 64159306
chr5 90350662 90350668 TCF1 TRANSFAC yes 70681665
chr5 90350663 90350674 ESRRB JASPAR yes 64159307
chr5 90350663 90350674 ESRRB JASPAR yes 70681666
SNP sites on vista48429[chr5:90350466-90350674]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 90350502 rs62376490 T G
GSC GSC2 OTX1 PITX3
8371021
chr5 90350577 rs62376491 G A no 8371022
chr5 90350598 rs371010977 A G
CEBPB POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU5F1B
8371023
Genes possibly regulated by vista48429[chr5:90350466-90350674]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista48429[chr5:90350466-90350674]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results