EnhancerDB
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  3. vista48516[chr5:95240158-95240487]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48516[chr5:95240158-95240487]
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Tissue distribution of vista48516
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Transcription factor that possibly regulate vista48516[chr5:95240158-95240487]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 95240163 95240171 HOXA5 JASPAR yes 70685723
chr5 95240166 95240179 ELF3 JASPAR yes 70685724
chr5 95240167 95240178 ELF5 JASPAR yes 70685725
chr5 95240167 95240179 EHF JASPAR yes 70685726
chr5 95240167 95240179 ELF1 JASPAR yes 70685727
chr5 95240168 95240176 FEV JASPAR yes 70685728
chr5 95240176 95240182 ZNF354C JASPAR yes 70685729
chr5 95240201 95240218 NR3C1 JASPAR yes 70685730
chr5 95240232 95240247 MEF2A JASPAR yes 70685731
chr5 95240233 95240248 MEF2C JASPAR yes 70685732
chr5 95240236 95240240 YY1 TRANSFAC yes 70685733
chr5 95240250 95240265 LEF1 JASPAR yes 70685734
chr5 95240251 95240265 TCF7L2 JASPAR yes 70685735
chr5 95240254 95240260 LEF1 TRANSFAC yes 70685736
chr5 95240254 95240260 TCF4 TRANSFAC yes 70685737
chr5 95240256 95240272 POU4F3 JASPAR yes 70685738
chr5 95240259 95240273 POU4F1 JASPAR yes 70685739
chr5 95240259 95240275 POU4F2 JASPAR yes 70685740
chr5 95240259 95240275 POU4F3 JASPAR yes 70685741
chr5 95240260 95240276 POU4F2 JASPAR yes 70685742
chr5 95240260 95240276 POU4F3 JASPAR yes 70685743
chr5 95240262 95240276 POU4F1 JASPAR yes 70685744
chr5 95240299 95240306 NKX3-1 JASPAR yes 70685745
chr5 95240303 95240306 MYB TRANSFAC yes 70685746
chr5 95240303 95240315 FOXI1 JASPAR yes 70685747
chr5 95240304 95240322 MAFF JASPAR yes 70685748
chr5 95240305 95240320 MAFK JASPAR yes 70685749
chr5 95240307 95240320 POU3F3 JASPAR yes 70685750
chr5 95240308 95240320 POU2F1 JASPAR yes 70685751
chr5 95240308 95240321 POU3F3 JASPAR yes 70685752
chr5 95240308 95240322 POU1F1 JASPAR yes 70685753
chr5 95240309 95240320 NRL JASPAR yes 70685754
chr5 95240309 95240321 POU3F1 JASPAR yes 70685755
chr5 95240309 95240321 POU3F2 JASPAR yes 70685756
chr5 95240310 95240321 PHOX2A JASPAR yes 70685757
chr5 95240310 95240321 PROP1 JASPAR yes 70685758
chr5 95240343 95240359 POU4F2 JASPAR yes 70685759
chr5 95240343 95240359 POU4F3 JASPAR yes 70685760
chr5 95240344 95240354 PAX3 JASPAR yes 70685761
chr5 95240344 95240354 PAX7 JASPAR yes 70685762
chr5 95240345 95240359 POU4F1 JASPAR yes 70685763
chr5 95240346 95240356 LHX6 JASPAR yes 70685764
chr5 95240346 95240356 MNX1 JASPAR yes 70685765
chr5 95240346 95240356 POU6F1 JASPAR yes 70685766
chr5 95240347 95240355 LMX1A JASPAR yes 70685767
chr5 95240347 95240355 LMX1B JASPAR yes 70685768
chr5 95240347 95240355 NKX6-1 JASPAR yes 70685769
chr5 95240347 95240355 NKX6-2 JASPAR yes 70685770
chr5 95240347 95240355 VAX1 JASPAR yes 70685771
chr5 95240347 95240355 VAX2 JASPAR yes 70685772
chr5 95240347 95240355 VSX1 JASPAR yes 70685773
chr5 95240347 95240355 VSX2 JASPAR yes 70685774
chr5 95240348 95240359 PHOX2A JASPAR yes 70685775
chr5 95240348 95240359 PROP1 JASPAR yes 70685776
chr5 95240349 95240364 MEF2C JASPAR yes 70685777
chr5 95240352 95240356 YY1 TRANSFAC yes 70685778
chr5 95240361 95240364 MYB TRANSFAC yes 70685779
chr5 95240396 95240399 MYB TRANSFAC yes 70685780
chr5 95240396 95240414 SRF JASPAR yes 70685781
chr5 95240399 95240403 H1TF2 TRANSFAC yes 70685782
chr5 95240399 95240403 NFE TRANSFAC yes 70685783
chr5 95240399 95240403 SRF TRANSFAC yes 70685784
chr5 95240410 95240423 POU2F2 JASPAR yes 70685785
chr5 95240421 95240426 GATA1 TRANSFAC yes 70685786
chr5 95240445 95240464 CTCF JASPAR yes 70685787
chr5 95240459 95240463 ESR1 TRANSFAC yes 70685788
chr5 95240464 95240474 HOXA13 JASPAR yes 70685789
chr5 95240464 95240474 HOXB13 JASPAR yes 70685790
chr5 95240464 95240474 HOXD13 JASPAR yes 70685791
chr5 95240464 95240475 HOXA10 JASPAR yes 70685792
chr5 95240465 95240474 CDX1 JASPAR yes 70685793
chr5 95240465 95240476 CDX2 JASPAR yes 70685794
chr5 95240482 95240486 YY1 TRANSFAC yes 70685795
SNP sites on vista48516[chr5:95240158-95240487]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 95240327 rs3777195 A G no 8387029
chr5 95240431 rs183797778 G A no 8387030
Genes possibly regulated by vista48516[chr5:95240158-95240487]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 95087023 95158709 - GLRX ENSG00000173221.9 95158709 0.81 1.0 5542 18551
chr5 95187936 95195837 + C5orf27 ENSG00000236882.3 95187936 1.0 0.92 5543 47778
chr5 95220802 95297775 - ELL2 ENSG00000118985.10 95297775 0.69 0.99 5544 42712
Expression level of Genes
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miRNAs possibly regulated by vista48516[chr5:95240158-95240487]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results