EnhancerDB
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  3. vista4852[chr1:208135157-208135309]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4852[chr1:208135157-208135309]
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Tissue distribution of vista4852
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Transcription factor that possibly regulate vista4852[chr1:208135157-208135309]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 208135153 208135174 IRF1 JASPAR yes 34891304
chr1 208135153 208135174 IRF1 JASPAR yes 118446479
chr1 208135154 208135175 IRF1 JASPAR yes 34891305
chr1 208135154 208135175 IRF1 JASPAR yes 118446480
chr1 208135158 208135173 STAT2 JASPAR yes 34891306
chr1 208135158 208135173 STAT2 JASPAR yes 118446481
chr1 208135160 208135181 IRF1 JASPAR yes 34891307
chr1 208135160 208135181 IRF1 JASPAR yes 118446482
chr1 208135162 208135182 RREB1 JASPAR yes 34891308
chr1 208135162 208135182 RREB1 JASPAR yes 118446483
chr1 208135163 208135177 ONECUT3 JASPAR yes 34891309
chr1 208135163 208135177 ONECUT3 JASPAR yes 118446484
chr1 208135165 208135180 RUNX2 JASPAR yes 34891310
chr1 208135165 208135180 RUNX2 JASPAR yes 118446485
chr1 208135166 208135181 MEF2C JASPAR yes 34891311
chr1 208135166 208135181 MEF2C JASPAR yes 118446486
chr1 208135167 208135187 RREB1 JASPAR yes 34891312
chr1 208135167 208135187 RREB1 JASPAR yes 118446487
chr1 208135169 208135184 FOXP1 JASPAR yes 34891313
chr1 208135169 208135184 FOXP1 JASPAR yes 118446488
chr1 208135171 208135183 FOXC2 JASPAR yes 34891314
chr1 208135171 208135183 FOXC2 JASPAR yes 118446489
chr1 208135172 208135183 FOXP2 JASPAR yes 34891315
chr1 208135172 208135183 FOXP2 JASPAR yes 118446490
chr1 208135172 208135193 IRF1 JASPAR yes 34891316
chr1 208135172 208135193 IRF1 JASPAR yes 118446491
chr1 208135178 208135184 SOX10 JASPAR yes 34891317
chr1 208135178 208135184 SOX10 JASPAR yes 118446492
chr1 208135186 208135207 IRF1 JASPAR yes 34891318
chr1 208135186 208135207 IRF1 JASPAR yes 118446493
chr1 208135188 208135203 AR JASPAR yes 34891319
chr1 208135188 208135203 STAT2 JASPAR yes 34891320
chr1 208135188 208135203 AR JASPAR yes 118446494
chr1 208135188 208135203 STAT2 JASPAR yes 118446495
chr1 208135189 208135203 STAT1 JASPAR yes 34891321
chr1 208135189 208135203 STAT1 JASPAR yes 118446496
chr1 208135190 208135202 IRF1 JASPAR yes 34891322
chr1 208135190 208135202 IRF1 JASPAR yes 118446497
chr1 208135190 208135205 IRF9 JASPAR yes 34891323
chr1 208135190 208135205 IRF9 JASPAR yes 118446498
chr1 208135202 208135205 MYB TRANSFAC yes 34891324
chr1 208135202 208135205 MYB TRANSFAC yes 118446499
chr1 208135208 208135219 CDX2 JASPAR yes 34891325
chr1 208135208 208135219 CDX2 JASPAR yes 118446500
chr1 208135209 208135220 HOXA10 JASPAR yes 34891326
chr1 208135209 208135220 HOXA10 JASPAR yes 118446501
chr1 208135210 208135219 CDX1 JASPAR yes 34891327
chr1 208135210 208135219 CDX1 JASPAR yes 118446502
chr1 208135210 208135220 HOXA13 JASPAR yes 34891328
chr1 208135210 208135220 HOXB13 JASPAR yes 34891329
chr1 208135210 208135220 HOXD13 JASPAR yes 34891330
chr1 208135210 208135220 HOXA13 JASPAR yes 118446503
chr1 208135210 208135220 HOXB13 JASPAR yes 118446504
chr1 208135210 208135220 HOXD13 JASPAR yes 118446505
chr1 208135214 208135220 TBP TRANSFAC yes 34891331
chr1 208135214 208135220 TBP TRANSFAC yes 118446506
chr1 208135229 208135244 RFX5 JASPAR yes 34891332
chr1 208135229 208135244 RFX5 JASPAR yes 118446507
chr1 208135239 208135244 ETS2 TRANSFAC yes 34891333
chr1 208135239 208135244 ETS2 TRANSFAC yes 118446508
chr1 208135240 208135254 STAT1 JASPAR yes 34891334
chr1 208135240 208135254 STAT1 JASPAR yes 118446509
chr1 208135240 208135255 STAT2 JASPAR yes 34891335
chr1 208135240 208135255 STAT2 JASPAR yes 118446510
chr1 208135248 208135257 SOX9 JASPAR yes 34891336
chr1 208135248 208135257 SOX9 JASPAR yes 118446511
chr1 208135259 208135270 HOXA10 JASPAR yes 34891337
chr1 208135259 208135270 HOXA10 JASPAR yes 118446512
chr1 208135260 208135270 HOXA13 JASPAR yes 34891338
chr1 208135260 208135270 HOXA13 JASPAR yes 118446513
chr1 208135260 208135272 MEF2D JASPAR yes 34891339
chr1 208135260 208135272 MEF2D JASPAR yes 118446514
chr1 208135261 208135273 FOXI1 JASPAR yes 34891340
chr1 208135261 208135273 FOXI1 JASPAR yes 118446515
chr1 208135271 208135289 SRF JASPAR yes 34891341
chr1 208135271 208135289 SRF JASPAR yes 118446516
chr1 208135274 208135288 TCF7L2 JASPAR yes 34891342
chr1 208135274 208135288 TCF7L2 JASPAR yes 118446517
chr1 208135274 208135289 LEF1 JASPAR yes 34891343
chr1 208135274 208135289 LEF1 JASPAR yes 118446518
chr1 208135279 208135294 PRDM1 JASPAR yes 34891344
chr1 208135279 208135294 PRDM1 JASPAR yes 118446519
chr1 208135280 208135301 IRF1 JASPAR yes 34891345
chr1 208135280 208135301 IRF1 JASPAR yes 118446520
chr1 208135284 208135289 ETS2 TRANSFAC yes 34891346
chr1 208135284 208135289 ETS2 TRANSFAC yes 118446521
chr1 208135284 208135299 PRDM1 JASPAR yes 34891347
chr1 208135284 208135299 PRDM1 JASPAR yes 118446522
SNP sites on vista4852[chr1:208135157-208135309]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 208135159 rs11289985 GA G
IRF1 STAT2
897695
chr1 208135159 rs145724682 G GA,GAAA,GAAAA
IRF1 STAT2
897696
chr1 208135159 rs573966984 G GAAA
IRF1 STAT2
897697
chr1 208135162 rs200841173 A AAAAAAC
IRF1 RREB1 STAT2
897698
chr1 208135162 rs540875563 A AAAAAAC,AAAC
IRF1 RREB1 STAT2
897699
chr1 208135169 rs540202634 A C
FOXP1 IRF1 MEF2C ONECUT3 RREB1 RUNX2 STAT2
897700
chr1 208135170 rs75391399 C A
FOXP1 IRF1 MEF2C ONECUT3 RREB1 RUNX2 STAT2
897701
Genes possibly regulated by vista4852[chr1:208135157-208135309]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 208057594 208084747 - CD34 ENSG00000174059.12 208084747 0.75 0.97 1803 49590
Expression level of Genes
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miRNAs possibly regulated by vista4852[chr1:208135157-208135309]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results