EnhancerDB
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  3. vista48540[chr5:95845653-95846023]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48540[chr5:95845653-95846023]
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Tissue distribution of vista48540
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Transcription factor that possibly regulate vista48540[chr5:95845653-95846023]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 95845645 95846043 TCF12 UCSC Txn Factor no Conserved 108535826
chr5 95845685 95846039 EP300 UCSC Txn Factor no Conserved 108535827
chr5 95845713 95846075 STAT3 UCSC Txn Factor no Conserved 108535828
chr5 95845717 95846036 FOSL2 UCSC Txn Factor no Conserved 108535829
chr5 95845741 95846027 CEBPB UCSC Txn Factor no Conserved 108535830
chr5 95845749 95846015 FOS UCSC Txn Factor no Conserved 108535831
chr5 95845758 95846038 STAT1 UCSC Txn Factor no Conserved 108535832
chr5 95845662 95845673 CDX2 JASPAR yes 64448063
chr5 95845662 95845673 CDX2 JASPAR yes 70686975
chr5 95845663 95845674 HOXA10 JASPAR yes 64448064
chr5 95845663 95845674 HOXA10 JASPAR yes 70686976
chr5 95845664 95845673 CDX1 JASPAR yes 64448065
chr5 95845664 95845673 CDX1 JASPAR yes 70686977
chr5 95845685 95845689 TEAD2 TRANSFAC yes 64448066
chr5 95845685 95845689 TEAD2 TRANSFAC yes 70686978
chr5 95845687 95845690 MYB TRANSFAC yes 64448067
chr5 95845687 95845690 MYB TRANSFAC yes 70686979
chr5 95845688 95845704 SOX8 JASPAR yes 64448068
chr5 95845688 95845704 SOX8 JASPAR yes 70686980
chr5 95845693 95845704 FOXH1 JASPAR yes 64448069
chr5 95845693 95845704 FOXH1 JASPAR yes 70686981
chr5 95845694 95845700 ZNF354C JASPAR yes 64448070
chr5 95845694 95845700 ZNF354C JASPAR yes 70686982
chr5 95845707 95845713 TBP TRANSFAC yes 64448071
chr5 95845707 95845713 TBP TRANSFAC yes 70686983
chr5 95845707 95845718 FOXC1 JASPAR yes 64448072
chr5 95845707 95845718 FOXC1 JASPAR yes 70686984
chr5 95845717 95845732 HNF4G JASPAR yes 64448073
chr5 95845717 95845732 LEF1 JASPAR yes 64448074
chr5 95845717 95845732 HNF4G JASPAR yes 70686985
chr5 95845717 95845732 LEF1 JASPAR yes 70686986
chr5 95845718 95845733 HNF4A JASPAR yes 64448075
chr5 95845718 95845733 HNF4A JASPAR yes 70686987
chr5 95845755 95845769 ONECUT2 JASPAR yes 64448076
chr5 95845755 95845769 ONECUT3 JASPAR yes 64448077
chr5 95845755 95845769 ONECUT2 JASPAR yes 70686988
chr5 95845755 95845769 ONECUT3 JASPAR yes 70686989
chr5 95845758 95845763 MYB TRANSFAC yes 64448078
chr5 95845758 95845763 MYB TRANSFAC yes 70686990
chr5 95845770 95845773 MYB TRANSFAC yes 64448079
chr5 95845770 95845773 MYB TRANSFAC yes 70686991
chr5 95845780 95845790 MAX JASPAR yes 64448080
chr5 95845780 95845790 MAX JASPAR yes 70686992
chr5 95845788 95845793 GATA2 JASPAR yes 64448081
chr5 95845788 95845793 GATA2 JASPAR yes 70686993
chr5 95845806 95845817 TBX20 JASPAR yes 64448082
chr5 95845806 95845817 TBX20 JASPAR yes 70686994
chr5 95845816 95845821 GATA2 JASPAR yes 64448083
chr5 95845816 95845821 GATA2 JASPAR yes 70686995
chr5 95845824 95845835 NRL JASPAR yes 64448084
chr5 95845824 95845835 NRL JASPAR yes 70686996
chr5 95845826 95845838 CREB1 JASPAR yes 64448085
chr5 95845826 95845838 CREB1 JASPAR yes 70686997
chr5 95845828 95845842 BATF3 JASPAR yes 64448086
chr5 95845828 95845842 BATF3 JASPAR yes 70686998
chr5 95845830 95845844 RORA JASPAR yes 64448087
chr5 95845830 95845844 RORA JASPAR yes 70686999
chr5 95845831 95845836 ATF1 TRANSFAC yes 64448088
chr5 95845831 95845836 ATF1 TRANSFAC yes 70687000
chr5 95845831 95845839 CREB1 JASPAR yes 64448089
chr5 95845831 95845839 GMEB2 JASPAR yes 64448090
chr5 95845831 95845839 CREB1 JASPAR yes 70687001
chr5 95845831 95845839 GMEB2 JASPAR yes 70687002
chr5 95845843 95845858 STAT1 JASPAR yes 64448091
chr5 95845843 95845858 STAT1 JASPAR yes 70687003
chr5 95845845 95845856 STAT1 JASPAR yes 64448092
chr5 95845845 95845856 STAT3 JASPAR yes 64448093
chr5 95845845 95845856 STAT1 JASPAR yes 70687004
chr5 95845845 95845856 STAT3 JASPAR yes 70687005
chr5 95845846 95845854 STAT6 TRANSFAC yes 64448094
chr5 95845846 95845854 STAT6 TRANSFAC yes 70687006
chr5 95845849 95845860 NFKB1 JASPAR yes 64448095
chr5 95845849 95845860 NFKB1 JASPAR yes 70687007
chr5 95845850 95845855 ETS2 TRANSFAC yes 64448096
chr5 95845850 95845855 ETS2 TRANSFAC yes 70687008
chr5 95845850 95845860 RELA JASPAR yes 64448097
chr5 95845850 95845860 RELA JASPAR yes 70687009
chr5 95845863 95845867 YY1 TRANSFAC yes 64448098
chr5 95845863 95845867 YY1 TRANSFAC yes 70687010
chr5 95845863 95845874 CEBPB JASPAR yes 64448099
chr5 95845863 95845874 CEBPB JASPAR yes 70687011
chr5 95845864 95845875 CEBPA JASPAR yes 64448100
chr5 95845864 95845875 CEBPA JASPAR yes 70687012
chr5 95845884 95845898 JUN JASPAR yes 64448101
chr5 95845884 95845898 JUN JASPAR yes 70687013
chr5 95845887 95845898 FOSL2 JASPAR yes 64448102
chr5 95845887 95845898 JUNB JASPAR yes 64448103
chr5 95845887 95845898 FOSL2 JASPAR yes 70687014
chr5 95845887 95845898 JUNB JASPAR yes 70687015
chr5 95845888 95845899 FOS JASPAR yes 64448104
chr5 95845888 95845899 FOSL1 JASPAR yes 64448105
chr5 95845888 95845899 JUND JASPAR yes 64448106
chr5 95845888 95845899 FOS JASPAR yes 70687016
chr5 95845888 95845899 FOSL1 JASPAR yes 70687017
chr5 95845888 95845899 JUND JASPAR yes 70687018
chr5 95845890 95845897 JUN TRANSFAC yes 64448107
chr5 95845890 95845897 JUN TRANSFAC yes 70687019
chr5 95845911 95845922 NFE2 JASPAR yes 64448108
chr5 95845911 95845922 NFE2 JASPAR yes 70687020
chr5 95845925 95845935 HOXB13 JASPAR yes 64448109
chr5 95845925 95845935 HOXB13 JASPAR yes 70687021
chr5 95845925 95845940 STAT1 JASPAR yes 64448110
chr5 95845925 95845940 STAT1 JASPAR yes 70687022
chr5 95845927 95845938 STAT1 JASPAR yes 64448111
chr5 95845927 95845938 STAT1 JASPAR yes 70687023
chr5 95845931 95845939 EHF JASPAR yes 64448112
chr5 95845931 95845939 EHF JASPAR yes 70687024
chr5 95845951 95845971 PPARG JASPAR yes 64448113
chr5 95845951 95845971 PPARG JASPAR yes 70687025
chr5 95845955 95845959 LFA1 TRANSFAC yes 64448114
chr5 95845955 95845959 LFA1 TRANSFAC yes 70687026
chr5 95845967 95845971 H1TF2 TRANSFAC yes 64448115
chr5 95845967 95845971 NFE TRANSFAC yes 64448116
chr5 95845967 95845971 SRF TRANSFAC yes 64448117
chr5 95845967 95845971 H1TF2 TRANSFAC yes 70687027
chr5 95845967 95845971 NFE TRANSFAC yes 70687028
chr5 95845967 95845971 SRF TRANSFAC yes 70687029
chr5 95845970 95845985 HNF4A JASPAR yes 64448118
chr5 95845970 95845985 HNF4A JASPAR yes 70687030
chr5 95845971 95845985 NR2F1 JASPAR yes 64448119
chr5 95845971 95845985 NR2F1 JASPAR yes 70687031
chr5 95845971 95845986 HNF4G JASPAR yes 64448120
chr5 95845971 95845986 HNF4G JASPAR yes 70687032
chr5 95845997 95846001 YY1 TRANSFAC yes 64448121
chr5 95845997 95846001 YY1 TRANSFAC yes 70687033
chr5 95845998 95846006 FEV JASPAR yes 64448122
chr5 95845998 95846006 FEV JASPAR yes 70687034
chr5 95846015 95846021 TCF4 TRANSFAC yes 64448123
chr5 95846015 95846021 TCF4 TRANSFAC yes 70687035
chr5 95846019 95846034 HSF1 JASPAR yes 64448124
chr5 95846019 95846034 HSF1 JASPAR yes 70687036
chr5 95846020 95846033 HSF4 JASPAR yes 64448125
chr5 95846020 95846033 HSF4 JASPAR yes 70687037
SNP sites on vista48540[chr5:95845653-95846023]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 95845708 rs3853210 T A
EP300 FOXC1 TBP TCF12
8391492
chr5 95845709 rs190416256 A T
EP300 FOXC1 TBP TCF12
8391493
chr5 95845715 rs115849260 A G
EP300 FOXC1 STAT3 TCF12
8391494
chr5 95845751 rs261961 A G
CEBPB EP300 FOS FOSL2 STAT3 TCF12
8391495
chr5 95845847 rs77085368 T C
CEBPB EP300 FOS FOSL2 STAT1 STAT3 STAT6 TCF12
8391496
chr5 95845854 rs17086188 A G
CEBPB EP300 ETS2 FOS FOSL2 NFKB1 RELA STAT1 STAT3 STAT6 TCF12
8391497
chr5 95845972 rs17086189 T C
CEBPB EP300 FOS FOSL2 HNF4A HNF4G NR2F1 STAT1 STAT3 TCF12
8391498
Genes possibly regulated by vista48540[chr5:95845653-95846023]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 95726119 95769847 - PCSK1 ENSG00000175426.6 95769847 0.88 1.0 5545 24194
chr5 95860971 96115299 + CAST ENSG00000153113.19 95860971 0.79 0.99 5546 85052
Expression level of Genes
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miRNAs possibly regulated by vista48540[chr5:95845653-95846023]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results