EnhancerDB
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  3. vista48541[chr5:95853104-95853290]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48541[chr5:95853104-95853290]
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Tissue distribution of vista48541
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Transcription factor that possibly regulate vista48541[chr5:95853104-95853290]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 95853102 95853116 FOXF2 JASPAR yes 64448775
chr5 95853102 95853116 FOXF2 JASPAR yes 70687038
chr5 95853102 95853117 FOXP1 JASPAR yes 64448776
chr5 95853102 95853117 FOXP1 JASPAR yes 70687039
chr5 95853103 95853114 FOXH1 JASPAR yes 64448777
chr5 95853103 95853114 FOXH1 JASPAR yes 70687040
chr5 95853104 95853116 FOXC2 JASPAR yes 64448778
chr5 95853104 95853116 FOXC2 JASPAR yes 70687041
chr5 95853105 95853116 FOXP2 JASPAR yes 64448779
chr5 95853105 95853116 FOXP2 JASPAR yes 70687042
chr5 95853105 95853117 FOXI1 JASPAR yes 64448780
chr5 95853105 95853117 FOXI1 JASPAR yes 70687043
chr5 95853107 95853115 FOXG1 JASPAR yes 64448781
chr5 95853107 95853115 FOXO3 JASPAR yes 64448782
chr5 95853107 95853115 FOXG1 JASPAR yes 70687044
chr5 95853107 95853115 FOXO3 JASPAR yes 70687045
chr5 95853131 95853135 TEAD2 TRANSFAC yes 64448783
chr5 95853131 95853135 TEAD2 TRANSFAC yes 70687046
chr5 95853143 95853162 RFX2 JASPAR yes 64448784
chr5 95853143 95853162 RFX2 JASPAR yes 70687047
chr5 95853147 95853163 RFX2 JASPAR yes 64448785
chr5 95853147 95853163 RFX3 JASPAR yes 64448786
chr5 95853147 95853163 RFX4 JASPAR yes 64448787
chr5 95853147 95853163 RFX2 JASPAR yes 70687048
chr5 95853147 95853163 RFX3 JASPAR yes 70687049
chr5 95853147 95853163 RFX4 JASPAR yes 70687050
chr5 95853148 95853167 RFX2 JASPAR yes 64448788
chr5 95853148 95853167 RFX2 JASPAR yes 70687051
chr5 95853150 95853155 MYC TRANSFAC yes 64448789
chr5 95853150 95853155 MYC TRANSFAC yes 70687052
chr5 95853168 95853182 TLX1 JASPAR yes 64448790
chr5 95853168 95853182 TLX1 JASPAR yes 70687053
chr5 95853170 95853189 RFX2 JASPAR yes 64448791
chr5 95853170 95853189 RFX2 JASPAR yes 70687054
chr5 95853174 95853190 RFX2 JASPAR yes 64448792
chr5 95853174 95853190 RFX3 JASPAR yes 64448793
chr5 95853174 95853190 RFX4 JASPAR yes 64448794
chr5 95853174 95853190 RFX5 JASPAR yes 64448795
chr5 95853174 95853190 RFX2 JASPAR yes 70687055
chr5 95853174 95853190 RFX3 JASPAR yes 70687056
chr5 95853174 95853190 RFX4 JASPAR yes 70687057
chr5 95853174 95853190 RFX5 JASPAR yes 70687058
chr5 95853175 95853194 RFX2 JASPAR yes 64448796
chr5 95853175 95853194 RFX2 JASPAR yes 70687059
chr5 95853188 95853202 FOXF2 JASPAR yes 64448797
chr5 95853188 95853202 FOXF2 JASPAR yes 70687060
chr5 95853193 95853201 FOXG1 JASPAR yes 64448798
chr5 95853193 95853201 FOXG1 JASPAR yes 70687061
chr5 95853213 95853217 YY1 TRANSFAC yes 64448799
chr5 95853213 95853217 YY1 TRANSFAC yes 70687062
chr5 95853213 95853223 NFATC3 JASPAR yes 64448800
chr5 95853213 95853223 NFATC3 JASPAR yes 70687063
chr5 95853236 95853257 ZNF263 JASPAR yes 64448801
chr5 95853236 95853257 ZNF263 JASPAR yes 70687064
chr5 95853247 95853252 ETS2 TRANSFAC yes 64448802
chr5 95853247 95853252 ETS2 TRANSFAC yes 70687065
chr5 95853255 95853260 GATA2 JASPAR yes 64448803
chr5 95853255 95853260 GATA2 JASPAR yes 70687066
SNP sites on vista48541[chr5:95853104-95853290]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 95853192 rs2611730 C A
FOXF2 RFX2
8391570
chr5 95853233 rs574647794 A G no 8391571
chr5 95853253 rs58352393 G A
ZNF263
8391572
Genes possibly regulated by vista48541[chr5:95853104-95853290]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 95726119 95769847 - PCSK1 ENSG00000175426.6 95769847 0.88 1.0 5545 16743
chr5 95860971 96115299 + CAST ENSG00000153113.19 95860971 0.79 0.99 5546 92319
Expression level of Genes
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miRNAs possibly regulated by vista48541[chr5:95853104-95853290]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results