EnhancerDB
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  3. vista48551[chr5:96142552-96142955]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48551[chr5:96142552-96142955]
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Tissue distribution of vista48551
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Transcription factor that possibly regulate vista48551[chr5:96142552-96142955]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 96142891 96143853 E2F1 UCSC Txn Factor no Conserved 108535836
chr5 96142897 96144512 POLR2A UCSC Txn Factor no Conserved 108535837
chr5 96142552 96142567 FOXP1 JASPAR yes 70687415
chr5 96142555 96142570 PRDM1 JASPAR yes 70687416
chr5 96142555 96142570 STAT2 JASPAR yes 70687417
chr5 96142555 96142573 NR3C1 JASPAR yes 70687418
chr5 96142561 96142576 HSF1 JASPAR yes 70687419
chr5 96142562 96142575 HSF2 JASPAR yes 70687420
chr5 96142567 96142580 HSF1 JASPAR yes 70687421
chr5 96142567 96142580 HSF2 JASPAR yes 70687422
chr5 96142589 96142598 ZEB1 JASPAR yes 70687423
chr5 96142592 96142597 USF2 TRANSFAC yes 70687424
chr5 96142609 96142622 POU3F3 JASPAR yes 70687425
chr5 96142609 96142623 POU1F1 JASPAR yes 70687426
chr5 96142610 96142622 POU3F1 JASPAR yes 70687427
chr5 96142610 96142622 POU3F2 JASPAR yes 70687428
chr5 96142613 96142623 POU6F2 JASPAR yes 70687429
chr5 96142614 96142624 ALX3 JASPAR yes 70687430
chr5 96142614 96142624 EMX2 JASPAR yes 70687431
chr5 96142614 96142624 ESX1 JASPAR yes 70687432
chr5 96142614 96142624 GBX2 JASPAR yes 70687433
chr5 96142614 96142624 GSX1 JASPAR yes 70687434
chr5 96142614 96142624 GSX2 JASPAR yes 70687435
chr5 96142614 96142624 HESX1 JASPAR yes 70687436
chr5 96142614 96142624 HOXB2 JASPAR yes 70687437
chr5 96142614 96142624 HOXB3 JASPAR yes 70687438
chr5 96142614 96142624 LBX2 JASPAR yes 70687439
chr5 96142614 96142624 LHX2 JASPAR yes 70687440
chr5 96142614 96142624 LHX6 JASPAR yes 70687441
chr5 96142614 96142624 MEOX1 JASPAR yes 70687442
chr5 96142614 96142624 MEOX2 JASPAR yes 70687443
chr5 96142614 96142624 MIXL1 JASPAR yes 70687444
chr5 96142614 96142624 MNX1 JASPAR yes 70687445
chr5 96142614 96142624 NOTO JASPAR yes 70687446
chr5 96142614 96142624 POU6F1 JASPAR yes 70687447
chr5 96142614 96142624 RAX JASPAR yes 70687448
chr5 96142614 96142625 HOXA10 JASPAR yes 70687449
chr5 96142615 96142623 BSX JASPAR yes 70687450
chr5 96142615 96142623 DLX6 JASPAR yes 70687451
chr5 96142615 96142623 EN1 JASPAR yes 70687452
chr5 96142615 96142623 ISX JASPAR yes 70687453
chr5 96142615 96142623 LBX1 JASPAR yes 70687454
chr5 96142615 96142623 LHX9 JASPAR yes 70687455
chr5 96142615 96142623 LMX1A JASPAR yes 70687456
chr5 96142615 96142623 LMX1B JASPAR yes 70687457
chr5 96142615 96142623 NKX6-1 JASPAR yes 70687458
chr5 96142615 96142623 NKX6-2 JASPAR yes 70687459
chr5 96142615 96142623 PAX4 JASPAR yes 70687460
chr5 96142615 96142623 PDX1 JASPAR yes 70687461
chr5 96142615 96142623 PRRX1 JASPAR yes 70687462
chr5 96142615 96142623 RAX2 JASPAR yes 70687463
chr5 96142615 96142623 SHOX JASPAR yes 70687464
chr5 96142615 96142623 UNCX JASPAR yes 70687465
chr5 96142615 96142623 VAX1 JASPAR yes 70687466
chr5 96142615 96142623 VAX2 JASPAR yes 70687467
chr5 96142615 96142623 VSX1 JASPAR yes 70687468
chr5 96142615 96142623 VSX2 JASPAR yes 70687469
chr5 96142615 96142625 HOXB13 JASPAR yes 70687470
chr5 96142615 96142625 HOXD13 JASPAR yes 70687471
chr5 96142615 96142631 POU4F2 JASPAR yes 70687472
chr5 96142622 96142637 TFAP2C JASPAR yes 70687473
chr5 96142650 96142654 H1TF2 TRANSFAC yes 70687474
chr5 96142650 96142654 NFE TRANSFAC yes 70687475
chr5 96142650 96142654 SRF TRANSFAC yes 70687476
chr5 96142657 96142677 RREB1 JASPAR yes 70687477
chr5 96142657 96142678 IRF1 JASPAR yes 70687478
chr5 96142662 96142682 RREB1 JASPAR yes 70687479
chr5 96142663 96142684 IRF1 JASPAR yes 70687480
chr5 96142664 96142670 TCF4 TRANSFAC yes 70687481
chr5 96142664 96142679 FOXP1 JASPAR yes 70687482
chr5 96142667 96142679 IRF1 JASPAR yes 70687483
chr5 96142667 96142687 RREB1 JASPAR yes 70687484
chr5 96142668 96142689 IRF1 JASPAR yes 70687485
chr5 96142669 96142675 TCF4 TRANSFAC yes 70687486
chr5 96142669 96142684 FOXP1 JASPAR yes 70687487
chr5 96142672 96142684 IRF1 JASPAR yes 70687488
chr5 96142672 96142692 RREB1 JASPAR yes 70687489
chr5 96142673 96142694 IRF1 JASPAR yes 70687490
chr5 96142674 96142680 TCF4 TRANSFAC yes 70687491
chr5 96142674 96142689 FOXP1 JASPAR yes 70687492
chr5 96142675 96142695 RREB1 JASPAR yes 70687493
chr5 96142677 96142689 IRF1 JASPAR yes 70687494
chr5 96142677 96142697 RREB1 JASPAR yes 70687495
chr5 96142679 96142685 TCF4 TRANSFAC yes 70687496
chr5 96142679 96142694 FOXP1 JASPAR yes 70687497
chr5 96142680 96142700 RREB1 JASPAR yes 70687498
chr5 96142684 96142690 TCF4 TRANSFAC yes 70687499
chr5 96142692 96142698 TCF4 TRANSFAC yes 70687500
chr5 96142695 96142710 HNF1A JASPAR yes 70687501
chr5 96142696 96142706 ESX1 JASPAR yes 70687502
chr5 96142696 96142706 GBX2 JASPAR yes 70687503
chr5 96142696 96142706 RAX JASPAR yes 70687504
chr5 96142696 96142708 HNF1B JASPAR yes 70687505
chr5 96142696 96142709 HNF1B JASPAR yes 70687506
chr5 96142697 96142705 BARX1 JASPAR yes 70687507
chr5 96142697 96142706 VENTX JASPAR yes 70687508
chr5 96142701 96142709 FOXO3 JASPAR yes 70687509
chr5 96142741 96142751 HOXB13 JASPAR yes 70687510
chr5 96142769 96142783 NR2F1 JASPAR yes 70687511
chr5 96142783 96142789 SOX10 JASPAR yes 70687512
chr5 96142799 96142812 ELF1 JASPAR yes 70687513
chr5 96142802 96142812 ETV6 JASPAR yes 70687514
chr5 96142803 96142811 EHF JASPAR yes 70687515
chr5 96142804 96142811 SPI1 JASPAR yes 70687516
chr5 96142818 96142828 MZF1 JASPAR yes 70687517
chr5 96142818 96142830 INSM1 JASPAR yes 70687518
chr5 96142819 96142833 PLAG1 JASPAR yes 70687519
chr5 96142819 96142834 NR2C2 JASPAR yes 70687520
chr5 96142821 96142831 SP1 JASPAR yes 70687521
chr5 96142840 96142843 MYB TRANSFAC yes 70687522
chr5 96142843 96142849 LEF1 TRANSFAC yes 70687523
chr5 96142843 96142849 SOX10 JASPAR yes 70687524
chr5 96142852 96142862 FIGLA JASPAR yes 70687525
chr5 96142854 96142859 USF2 TRANSFAC yes 70687526
chr5 96142875 96142881 GATA3 JASPAR yes 70687527
chr5 96142884 96142896 IRF1 JASPAR yes 70687528
chr5 96142894 96142900 ATF1 TRANSFAC yes 70687529
chr5 96142894 96142906 CREB1 JASPAR yes 70687530
chr5 96142910 96142918 GATA3 JASPAR yes 70687531
SNP sites on vista48551[chr5:96142552-96142955]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 96142554 rs112308428 G GA,GAA,GAAA
FOXP1
8393578
chr5 96142554 rs35366279 G GAA
FOXP1
8393579
chr5 96142554 rs61277270 G GA,GAA,GAAA
FOXP1
8393580
chr5 96142576 rs111697390 T C
HSF1 HSF2
8393581
chr5 96142595 rs192262963 C T
USF2 ZEB1
8393582
chr5 96142610 rs58725060 C T
POU1F1 POU3F1 POU3F2 POU3F3
8393583
chr5 96142683 rs371429555 TGTTTTG T
FOXP1 IRF1 RREB1 TCF4
8393584
chr5 96142691 rs372765819 T TC
FOXP1 IRF1 RREB1
8393585
chr5 96142806 rs34750 G C
EHF ELF1 ETV6 SPI1
8393586
chr5 96142889 rs190240361 T C
IRF1
8393587
chr5 96142935 rs28049 G A
E2F1 POLR2A
8393588
Genes possibly regulated by vista48551[chr5:96142552-96142955]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 96096521 96143803 - ERAP1 ENSG00000164307.8 96143803 0.8 0.99 5547 99152
chr5 96211643 96255420 + ERAP2 ENSG00000164308.12 96211643 0.92 0.95 5549 31312
Expression level of Genes
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miRNAs possibly regulated by vista48551[chr5:96142552-96142955]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results