EnhancerDB
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  3. vista48552[chr5:96152147-96152486]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48552[chr5:96152147-96152486]
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Tissue distribution of vista48552
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Transcription factor that possibly regulate vista48552[chr5:96152147-96152486]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 96152073 96152547 RUNX3 UCSC Txn Factor no Conserved 108535838
chr5 96152142 96152156 SPIC JASPAR yes 64470487
chr5 96152142 96152156 SPIC JASPAR yes 70687532
chr5 96152143 96152156 ELF1 JASPAR yes 64470488
chr5 96152143 96152156 ELF1 JASPAR yes 70687533
chr5 96152144 96152147 MYB TRANSFAC yes 64470489
chr5 96152144 96152147 MYB TRANSFAC yes 70687534
chr5 96152144 96152157 ELF3 JASPAR yes 64470490
chr5 96152144 96152157 ELF3 JASPAR yes 70687535
chr5 96152145 96152156 ELF5 JASPAR yes 64470491
chr5 96152145 96152156 ELF5 JASPAR yes 70687536
chr5 96152146 96152157 FLI1 JASPAR yes 64470492
chr5 96152146 96152157 FLI1 JASPAR yes 70687537
chr5 96152152 96152158 HiNF-A TRANSFAC yes 64470493
chr5 96152152 96152158 HiNF-A TRANSFAC yes 70687538
chr5 96152154 96152165 RUNX1 JASPAR yes 64470494
chr5 96152154 96152165 RUNX1 JASPAR yes 70687539
chr5 96152170 96152179 THAP1 JASPAR yes 64470495
chr5 96152170 96152179 THAP1 JASPAR yes 70687540
chr5 96152170 96152184 TLX1 JASPAR yes 64470496
chr5 96152170 96152184 TLX1 JASPAR yes 70687541
chr5 96152182 96152189 PEA3 TRANSFAC yes 64470497
chr5 96152182 96152189 PEA3 TRANSFAC yes 70687542
chr5 96152218 96152227 SNAI2 JASPAR yes 64470498
chr5 96152218 96152227 SNAI2 JASPAR yes 70687543
chr5 96152218 96152228 ID4 JASPAR yes 64470499
chr5 96152218 96152228 TCF3 JASPAR yes 64470500
chr5 96152218 96152228 TCF4 JASPAR yes 64470501
chr5 96152218 96152228 ID4 JASPAR yes 70687544
chr5 96152218 96152228 TCF3 JASPAR yes 70687545
chr5 96152218 96152228 TCF4 JASPAR yes 70687546
chr5 96152226 96152246 RREB1 JASPAR yes 64470502
chr5 96152226 96152246 RREB1 JASPAR yes 70687547
chr5 96152243 96152260 RARA JASPAR yes 64470503
chr5 96152243 96152260 RXRA JASPAR yes 64470504
chr5 96152243 96152260 RARA JASPAR yes 70687548
chr5 96152243 96152260 RXRA JASPAR yes 70687549
chr5 96152267 96152271 TEAD2 TRANSFAC yes 64470505
chr5 96152267 96152271 TEAD2 TRANSFAC yes 70687550
chr5 96152269 96152280 PHOX2A JASPAR yes 64470506
chr5 96152269 96152280 PHOX2A JASPAR yes 70687551
chr5 96152273 96152287 POU1F1 JASPAR yes 64470507
chr5 96152273 96152287 POU1F1 JASPAR yes 70687552
chr5 96152274 96152286 POU3F1 JASPAR yes 64470508
chr5 96152274 96152286 POU3F2 JASPAR yes 64470509
chr5 96152274 96152286 POU3F1 JASPAR yes 70687553
chr5 96152274 96152286 POU3F2 JASPAR yes 70687554
chr5 96152274 96152287 POU3F3 JASPAR yes 64470510
chr5 96152274 96152287 POU3F3 JASPAR yes 70687555
chr5 96152275 96152279 YY1 TRANSFAC yes 64470511
chr5 96152275 96152279 YY1 TRANSFAC yes 70687556
chr5 96152275 96152287 POU2F1 JASPAR yes 64470512
chr5 96152275 96152287 POU2F1 JASPAR yes 70687557
chr5 96152276 96152285 POU3F4 JASPAR yes 64470513
chr5 96152276 96152285 POU5F1B JASPAR yes 64470514
chr5 96152276 96152285 POU3F4 JASPAR yes 70687558
chr5 96152276 96152285 POU5F1B JASPAR yes 70687559
chr5 96152278 96152281 MYB TRANSFAC yes 64470515
chr5 96152278 96152281 MYB TRANSFAC yes 70687560
chr5 96152283 96152286 MYB TRANSFAC yes 64470516
chr5 96152283 96152286 MYB TRANSFAC yes 70687561
chr5 96152283 96152299 SOX4 JASPAR yes 64470517
chr5 96152283 96152299 SOX4 JASPAR yes 70687562
chr5 96152286 96152290 YY1 TRANSFAC yes 64470518
chr5 96152286 96152290 YY1 TRANSFAC yes 70687563
chr5 96152289 96152304 RUNX2 JASPAR yes 64470519
chr5 96152289 96152304 RUNX2 JASPAR yes 70687564
chr5 96152293 96152303 RUNX3 JASPAR yes 64470520
chr5 96152293 96152303 RUNX3 JASPAR yes 70687565
chr5 96152294 96152303 RUNX2 JASPAR yes 64470521
chr5 96152294 96152303 RUNX2 JASPAR yes 70687566
chr5 96152307 96152321 GLIS3 JASPAR yes 64470522
chr5 96152307 96152321 GLIS3 JASPAR yes 70687567
chr5 96152335 96152348 SCRT2 JASPAR yes 64470523
chr5 96152335 96152348 SCRT2 JASPAR yes 70687568
chr5 96152342 96152347 MYC TRANSFAC yes 64470524
chr5 96152342 96152347 MYC TRANSFAC yes 70687569
chr5 96152358 96152362 ESR1 TRANSFAC yes 64470525
chr5 96152358 96152362 ESR1 TRANSFAC yes 70687570
chr5 96152360 96152380 TP53 JASPAR yes 64470526
chr5 96152360 96152380 TP53 JASPAR yes 70687571
chr5 96152388 96152399 EBF1 JASPAR yes 64470527
chr5 96152388 96152399 EBF1 JASPAR yes 70687572
chr5 96152404 96152409 GATA2 JASPAR yes 64470528
chr5 96152404 96152409 GATA2 JASPAR yes 70687573
chr5 96152415 96152424 THAP1 JASPAR yes 64470529
chr5 96152415 96152424 THAP1 JASPAR yes 70687574
chr5 96152418 96152422 LFA1 TRANSFAC yes 64470530
chr5 96152418 96152422 LFA1 TRANSFAC yes 70687575
chr5 96152423 96152438 RUNX2 JASPAR yes 64470531
chr5 96152423 96152438 RUNX2 JASPAR yes 70687576
chr5 96152435 96152447 EHF JASPAR yes 64470532
chr5 96152435 96152447 ELF1 JASPAR yes 64470533
chr5 96152435 96152447 ELF4 JASPAR yes 64470534
chr5 96152435 96152447 EHF JASPAR yes 70687577
chr5 96152435 96152447 ELF1 JASPAR yes 70687578
chr5 96152435 96152447 ELF4 JASPAR yes 70687579
chr5 96152435 96152448 ELF1 JASPAR yes 64470535
chr5 96152435 96152448 ELF1 JASPAR yes 70687580
chr5 96152436 96152443 SPI1 JASPAR yes 64470536
chr5 96152436 96152443 SPI1 JASPAR yes 70687581
chr5 96152436 96152444 EHF JASPAR yes 64470537
chr5 96152436 96152444 FEV JASPAR yes 64470538
chr5 96152436 96152444 EHF JASPAR yes 70687582
chr5 96152436 96152444 FEV JASPAR yes 70687583
chr5 96152451 96152465 TCF7L2 JASPAR yes 64470539
chr5 96152451 96152465 TCF7L2 JASPAR yes 70687584
SNP sites on vista48552[chr5:96152147-96152486]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 96152190 rs114166746 T C
RUNX3
8393636
chr5 96152205 rs190042154 G A
RUNX3
8393637
chr5 96152210 rs26520 C T
RUNX3
8393638
chr5 96152275 rs117269603 C T
PHOX2A POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 RUNX3 YY1
8393639
chr5 96152277 rs571904376 A G
PHOX2A POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B RUNX3 YY1
8393640
chr5 96152383 rs34756 A G
RUNX3
8393641
chr5 96152421 rs62376416 G A
LFA1 RUNX3 THAP1
8393642
chr5 96152436 rs35469836 G C
EHF ELF1 ELF4 FEV RUNX2 RUNX3 SPI1
8393643
chr5 96152484 rs112919392 C T
RUNX3
8393644
Genes possibly regulated by vista48552[chr5:96152147-96152486]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 96096521 96143803 - ERAP1 ENSG00000164307.8 96143803 0.8 0.99 5547 91656
chr5 96211643 96255420 + ERAP2 ENSG00000164308.12 96211643 0.92 0.95 5549 40843
Expression level of Genes
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miRNAs possibly regulated by vista48552[chr5:96152147-96152486]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results