EnhancerDB
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  3. vista48554[chr5:96194244-96194434]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48554[chr5:96194244-96194434]
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Tissue distribution of vista48554
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Transcription factor that possibly regulate vista48554[chr5:96194244-96194434]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 96194237 96194255 RARA JASPAR yes 64474505
chr5 96194237 96194255 RARA JASPAR yes 70687663
chr5 96194239 96194252 DUXA JASPAR yes 64474506
chr5 96194239 96194252 DUXA JASPAR yes 70687664
chr5 96194239 96194253 RORA JASPAR yes 64474507
chr5 96194239 96194253 RORA JASPAR yes 70687665
chr5 96194240 96194251 PHOX2A JASPAR yes 64474508
chr5 96194240 96194251 PHOX2A JASPAR yes 70687666
chr5 96194242 96194252 POU6F2 JASPAR yes 64474509
chr5 96194242 96194252 POU6F2 JASPAR yes 70687667
chr5 96194243 96194253 EMX1 JASPAR yes 64474510
chr5 96194243 96194253 EMX2 JASPAR yes 64474511
chr5 96194243 96194253 EVX2 JASPAR yes 64474512
chr5 96194243 96194253 GBX1 JASPAR yes 64474513
chr5 96194243 96194253 GBX2 JASPAR yes 64474514
chr5 96194243 96194253 GSX1 JASPAR yes 64474515
chr5 96194243 96194253 HOXA2 JASPAR yes 64474516
chr5 96194243 96194253 HOXB2 JASPAR yes 64474517
chr5 96194243 96194253 HOXB3 JASPAR yes 64474518
chr5 96194243 96194253 LHX2 JASPAR yes 64474519
chr5 96194243 96194253 LHX6 JASPAR yes 64474520
chr5 96194243 96194253 MEOX1 JASPAR yes 64474521
chr5 96194243 96194253 MEOX2 JASPAR yes 64474522
chr5 96194243 96194253 NOTO JASPAR yes 64474523
chr5 96194243 96194253 POU6F1 JASPAR yes 64474524
chr5 96194243 96194253 EMX1 JASPAR yes 70687668
chr5 96194243 96194253 EMX2 JASPAR yes 70687669
chr5 96194243 96194253 EVX2 JASPAR yes 70687670
chr5 96194243 96194253 GBX1 JASPAR yes 70687671
chr5 96194243 96194253 GBX2 JASPAR yes 70687672
chr5 96194243 96194253 GSX1 JASPAR yes 70687673
chr5 96194243 96194253 HOXA2 JASPAR yes 70687674
chr5 96194243 96194253 HOXB2 JASPAR yes 70687675
chr5 96194243 96194253 HOXB3 JASPAR yes 70687676
chr5 96194243 96194253 LHX2 JASPAR yes 70687677
chr5 96194243 96194253 LHX6 JASPAR yes 70687678
chr5 96194243 96194253 MEOX1 JASPAR yes 70687679
chr5 96194243 96194253 MEOX2 JASPAR yes 70687680
chr5 96194243 96194253 NOTO JASPAR yes 70687681
chr5 96194243 96194253 POU6F1 JASPAR yes 70687682
chr5 96194244 96194252 DLX6 JASPAR yes 64474525
chr5 96194244 96194252 EN1 JASPAR yes 64474526
chr5 96194244 96194252 LBX1 JASPAR yes 64474527
chr5 96194244 96194252 PAX4 JASPAR yes 64474528
chr5 96194244 96194252 PDX1 JASPAR yes 64474529
chr5 96194244 96194252 VAX1 JASPAR yes 64474530
chr5 96194244 96194252 VAX2 JASPAR yes 64474531
chr5 96194244 96194252 VSX1 JASPAR yes 64474532
chr5 96194244 96194252 VSX2 JASPAR yes 64474533
chr5 96194244 96194252 DLX6 JASPAR yes 70687683
chr5 96194244 96194252 EN1 JASPAR yes 70687684
chr5 96194244 96194252 LBX1 JASPAR yes 70687685
chr5 96194244 96194252 PAX4 JASPAR yes 70687686
chr5 96194244 96194252 PDX1 JASPAR yes 70687687
chr5 96194244 96194252 VAX1 JASPAR yes 70687688
chr5 96194244 96194252 VAX2 JASPAR yes 70687689
chr5 96194244 96194252 VSX1 JASPAR yes 70687690
chr5 96194244 96194252 VSX2 JASPAR yes 70687691
chr5 96194257 96194267 HOXC10 JASPAR yes 64474534
chr5 96194257 96194267 HOXC10 JASPAR yes 70687692
chr5 96194259 96194267 NKX6-1 JASPAR yes 64474535
chr5 96194259 96194267 NKX6-1 JASPAR yes 70687693
chr5 96194262 96194270 MEIS2 JASPAR yes 64474536
chr5 96194262 96194270 MEIS3 JASPAR yes 64474537
chr5 96194262 96194270 MEIS2 JASPAR yes 70687694
chr5 96194262 96194270 MEIS3 JASPAR yes 70687695
chr5 96194279 96194284 TFAP2A TRANSFAC yes 64474538
chr5 96194279 96194284 TFAP2A TRANSFAC yes 70687696
chr5 96194279 96194285 MZF1 JASPAR yes 64474539
chr5 96194279 96194285 MZF1 JASPAR yes 70687697
chr5 96194289 96194295 NFIC JASPAR yes 64474540
chr5 96194289 96194295 NFIC JASPAR yes 70687698
chr5 96194315 96194320 H4TF1 TRANSFAC yes 64474541
chr5 96194315 96194320 H4TF1 TRANSFAC yes 70687699
chr5 96194346 96194350 YY1 TRANSFAC yes 64474542
chr5 96194346 96194350 YY1 TRANSFAC yes 70687700
chr5 96194356 96194360 YY1 TRANSFAC yes 64474543
chr5 96194356 96194360 YY1 TRANSFAC yes 70687701
chr5 96194372 96194392 PPARG JASPAR yes 64474544
chr5 96194372 96194392 PPARG JASPAR yes 70687702
chr5 96194376 96194387 NFE2L2 JASPAR yes 64474545
chr5 96194376 96194387 NFE2L2 JASPAR yes 70687703
chr5 96194383 96194398 NR2C2 JASPAR yes 64474546
chr5 96194383 96194398 NR2C2 JASPAR yes 70687704
chr5 96194399 96194415 SOX4 JASPAR yes 64474547
chr5 96194399 96194415 SOX4 JASPAR yes 70687705
chr5 96194403 96194418 SCRT1 JASPAR yes 64474548
chr5 96194403 96194418 SCRT1 JASPAR yes 70687706
chr5 96194404 96194414 FIGLA JASPAR yes 64474549
chr5 96194404 96194414 ID4 JASPAR yes 64474550
chr5 96194404 96194414 TCF3 JASPAR yes 64474551
chr5 96194404 96194414 TCF4 JASPAR yes 64474552
chr5 96194404 96194414 FIGLA JASPAR yes 70687707
chr5 96194404 96194414 ID4 JASPAR yes 70687708
chr5 96194404 96194414 TCF3 JASPAR yes 70687709
chr5 96194404 96194414 TCF4 JASPAR yes 70687710
chr5 96194405 96194414 SNAI2 JASPAR yes 64474553
chr5 96194405 96194414 SNAI2 JASPAR yes 70687711
chr5 96194406 96194411 USF2 TRANSFAC yes 64474554
chr5 96194406 96194411 USF2 TRANSFAC yes 70687712
chr5 96194407 96194413 PTF TRANSFAC yes 64474555
chr5 96194407 96194413 PTF TRANSFAC yes 70687713
SNP sites on vista48554[chr5:96194244-96194434]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 96194251 rs6868625 A G
DLX6 DUXA EMX1 EMX2 EN1 EVX2 GBX1 GBX2 GSX1 HOXA2 HOXB2 HOXB3 LBX1 LHX2 LHX6 MEOX1 MEOX2 NOTO PAX4 PDX1 PHOX2A POU6F1 POU6F2 RARA RORA VAX1 VAX2 VSX1 VSX2
8393995
chr5 96194255 rs12519842 G A
RARA
8393996
Genes possibly regulated by vista48554[chr5:96194244-96194434]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 96096521 96143803 - ERAP1 ENSG00000164307.8 96143803 0.8 0.99 5547 49559
chr5 96149731 96271513 - CTD-2260A17.2 ENSG00000247121.2 96271513 0.65 1.0 5548 22921
chr5 96211643 96255420 + ERAP2 ENSG00000164308.12 96211643 0.92 0.95 5549 82791
chr5 96271098 96373219 + LNPEP ENSG00000113441.11 96271098 0.85 0.97 5550 23336
Expression level of Genes
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miRNAs possibly regulated by vista48554[chr5:96194244-96194434]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results