EnhancerDB
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  3. vista4869[chr1:208412497-208412696]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4869[chr1:208412497-208412696]
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Tissue distribution of vista4869
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Transcription factor that possibly regulate vista4869[chr1:208412497-208412696]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 208412363 208412755 CTCF UCSC Txn Factor no Conserved 107865528
chr1 208412416 208412699 SMC3 UCSC Txn Factor no Conserved 107865532
chr1 208412432 208412699 RAD21 UCSC Txn Factor no Conserved 107865538
chr1 208412485 208412500 FOXP1 JASPAR yes 34910921
chr1 208412485 208412500 FOXP1 JASPAR yes 118447222
chr1 208412494 208412509 MEF2C JASPAR yes 34910922
chr1 208412494 208412509 MEF2C JASPAR yes 118447223
chr1 208412497 208412512 FOXP1 JASPAR yes 34910923
chr1 208412497 208412512 FOXP1 JASPAR yes 118447224
chr1 208412498 208412504 TBP TRANSFAC yes 34910924
chr1 208412498 208412504 TBP TRANSFAC yes 118447225
chr1 208412498 208412513 FOXP1 JASPAR yes 34910925
chr1 208412498 208412513 FOXP1 JASPAR yes 118447226
chr1 208412498 208412519 IRF1 JASPAR yes 34910926
chr1 208412498 208412519 IRF1 JASPAR yes 118447227
chr1 208412499 208412514 FOXP1 JASPAR yes 34910927
chr1 208412499 208412514 FOXP1 JASPAR yes 118447228
chr1 208412552 208412571 CTCF JASPAR yes 34910928
chr1 208412552 208412571 CTCF JASPAR yes 118447229
chr1 208412566 208412580 GATA2 JASPAR yes 34910929
chr1 208412566 208412580 GATA2 JASPAR yes 118447230
chr1 208412571 208412574 MYB TRANSFAC yes 34910930
chr1 208412571 208412574 MYB TRANSFAC yes 118447231
chr1 208412579 208412593 SPI1 JASPAR yes 34910931
chr1 208412579 208412593 SPIC JASPAR yes 34910932
chr1 208412579 208412593 SPI1 JASPAR yes 118447232
chr1 208412579 208412593 SPIC JASPAR yes 118447233
chr1 208412629 208412640 NFKB1 JASPAR yes 34910933
chr1 208412629 208412640 NFKB1 JASPAR yes 118447234
chr1 208412630 208412640 REL JASPAR yes 34910934
chr1 208412630 208412640 REL JASPAR yes 118447235
chr1 208412643 208412656 TFAP2A JASPAR yes 34910935
chr1 208412643 208412656 TFAP2B JASPAR yes 34910936
chr1 208412643 208412656 TFAP2C JASPAR yes 34910937
chr1 208412643 208412656 TFAP2A JASPAR yes 118447236
chr1 208412643 208412656 TFAP2B JASPAR yes 118447237
chr1 208412643 208412656 TFAP2C JASPAR yes 118447238
chr1 208412654 208412675 ZNF263 JASPAR yes 34910938
chr1 208412654 208412675 ZNF263 JASPAR yes 118447239
chr1 208412673 208412679 SOX10 JASPAR yes 34910939
chr1 208412673 208412679 SOX10 JASPAR yes 118447240
chr1 208412693 208412697 NFE TRANSFAC yes 34910940
chr1 208412693 208412697 NFE TRANSFAC yes 118447241
SNP sites on vista4869[chr1:208412497-208412696]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 208412499 rs35635470 TA T
CTCF FOXP1 IRF1 MEF2C RAD21 SMC3 TBP
899837
chr1 208412499 rs397786188 TA T
CTCF FOXP1 IRF1 MEF2C RAD21 SMC3 TBP
899838
chr1 208412586 rs543470996 G A
CTCF RAD21 SMC3 SPI1 SPIC
899839
chr1 208412662 rs75333806 T A
CTCF RAD21 SMC3 ZNF263
899840
Genes possibly regulated by vista4869[chr1:208412497-208412696]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 208195587 208417665 - PLXNA2 ENSG00000076356.6 208417665 0.81 0.98 1804 95031
Expression level of Genes
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miRNAs possibly regulated by vista4869[chr1:208412497-208412696]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results