EnhancerDB
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  3. vista4873[chr1:208442735-208442900]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4873[chr1:208442735-208442900]
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Tissue distribution of vista4873
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Transcription factor that possibly regulate vista4873[chr1:208442735-208442900]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 208442737 208442749 EHF JASPAR yes 34913190
chr1 208442737 208442749 EHF JASPAR yes 118447328
chr1 208442737 208442750 ELF3 JASPAR yes 34913191
chr1 208442737 208442750 ELF3 JASPAR yes 118447329
chr1 208442738 208442749 ELF5 JASPAR yes 34913192
chr1 208442738 208442749 ELF5 JASPAR yes 118447330
chr1 208442741 208442747 ETS1 JASPAR yes 34913193
chr1 208442741 208442747 ETS1 JASPAR yes 118447331
chr1 208442745 208442761 RFX4 JASPAR yes 34913194
chr1 208442745 208442761 RFX4 JASPAR yes 118447332
chr1 208442758 208442768 GABPA JASPAR yes 34913195
chr1 208442758 208442768 GABPA JASPAR yes 118447333
chr1 208442759 208442767 EHF JASPAR yes 34913196
chr1 208442759 208442767 EHF JASPAR yes 118447334
chr1 208442781 208442786 ETS2 TRANSFAC yes 34913197
chr1 208442781 208442786 ETS2 TRANSFAC yes 118447335
chr1 208442785 208442791 HiNF-A TRANSFAC yes 34913198
chr1 208442785 208442791 HiNF-A TRANSFAC yes 118447336
chr1 208442797 208442808 GCM1 JASPAR yes 34913199
chr1 208442797 208442808 GCM1 JASPAR yes 118447337
chr1 208442798 208442808 GCM2 JASPAR yes 34913200
chr1 208442798 208442808 GCM2 JASPAR yes 118447338
chr1 208442798 208442818 RREB1 JASPAR yes 34913201
chr1 208442798 208442818 RREB1 JASPAR yes 118447339
chr1 208442800 208442820 RREB1 JASPAR yes 34913202
chr1 208442800 208442820 RREB1 JASPAR yes 118447340
chr1 208442802 208442822 RREB1 JASPAR yes 34913203
chr1 208442802 208442822 RREB1 JASPAR yes 118447341
chr1 208442804 208442824 RREB1 JASPAR yes 34913204
chr1 208442804 208442824 RREB1 JASPAR yes 118447342
chr1 208442806 208442826 RREB1 JASPAR yes 34913205
chr1 208442806 208442826 RREB1 JASPAR yes 118447343
chr1 208442808 208442828 RREB1 JASPAR yes 34913206
chr1 208442808 208442828 RREB1 JASPAR yes 118447344
chr1 208442810 208442830 RREB1 JASPAR yes 34913207
chr1 208442810 208442830 RREB1 JASPAR yes 118447345
chr1 208442812 208442832 RREB1 JASPAR yes 34913208
chr1 208442812 208442832 RREB1 JASPAR yes 118447346
chr1 208442814 208442834 RREB1 JASPAR yes 34913209
chr1 208442814 208442834 RREB1 JASPAR yes 118447347
chr1 208442882 208442892 MZF1 JASPAR yes 34913210
chr1 208442882 208442892 MZF1 JASPAR yes 118447348
chr1 208442884 208442895 CEBPB JASPAR yes 34913211
chr1 208442884 208442895 CEBPB JASPAR yes 118447349
chr1 208442885 208442890 TFAP2A TRANSFAC yes 34913212
chr1 208442885 208442890 TFAP2A TRANSFAC yes 118447350
chr1 208442885 208442891 MZF1 JASPAR yes 34913213
chr1 208442885 208442891 MZF1 JASPAR yes 118447351
SNP sites on vista4873[chr1:208442735-208442900]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 208442799 rs72741284 C A,T
GCM1 GCM2 RREB1
900068
chr1 208442802 rs11800621 C G
GCM1 GCM2 RREB1
900069
chr1 208442804 rs35744560 GCACA G
GCM1 GCM2 RREB1
900070
chr1 208442804 rs5780445 GCACA G
GCM1 GCM2 RREB1
900071
chr1 208442804 rs5780446 GCACA G
GCM1 GCM2 RREB1
900072
chr1 208442885 rs560193723 A G
CEBPB MZF1 TFAP2A
900073
Genes possibly regulated by vista4873[chr1:208442735-208442900]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 208195587 208417665 - PLXNA2 ENSG00000076356.6 208417665 0.81 0.98 1804 74930
Expression level of Genes
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miRNAs possibly regulated by vista4873[chr1:208442735-208442900]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 1.2938301123432688e-06 0.947205 0.692021 121
Expression level of miRNAs
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