EnhancerDB
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  3. vista4874[chr1:208443226-208443424]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4874[chr1:208443226-208443424]
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Tissue distribution of vista4874
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Transcription factor that possibly regulate vista4874[chr1:208443226-208443424]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 208443224 208443237 ZBED1 JASPAR yes 34913237
chr1 208443224 208443237 ZBED1 JASPAR yes 118447352
chr1 208443225 208443229 NFE TRANSFAC yes 34913238
chr1 208443225 208443229 NFE TRANSFAC yes 118447353
chr1 208443232 208443237 NFY TRANSFAC yes 34913239
chr1 208443232 208443237 NFY TRANSFAC yes 118447354
chr1 208443254 208443268 TCF7L2 JASPAR yes 34913240
chr1 208443254 208443268 TCF7L2 JASPAR yes 118447355
chr1 208443254 208443269 LEF1 JASPAR yes 34913241
chr1 208443254 208443269 LEF1 JASPAR yes 118447356
chr1 208443279 208443283 YY1 TRANSFAC yes 34913242
chr1 208443279 208443283 YY1 TRANSFAC yes 118447357
chr1 208443287 208443297 NFATC3 JASPAR yes 34913243
chr1 208443287 208443297 NFATC3 JASPAR yes 118447358
chr1 208443289 208443295 ETS1 JASPAR yes 34913244
chr1 208443289 208443295 ETS1 JASPAR yes 118447359
chr1 208443353 208443368 MEF2A JASPAR yes 34913245
chr1 208443353 208443368 MEF2A JASPAR yes 118447360
chr1 208443354 208443369 MEF2C JASPAR yes 34913246
chr1 208443354 208443369 MEF2C JASPAR yes 118447361
chr1 208443355 208443367 MEF2A JASPAR yes 34913247
chr1 208443355 208443367 MEF2D JASPAR yes 34913248
chr1 208443355 208443367 MEF2A JASPAR yes 118447362
chr1 208443355 208443367 MEF2D JASPAR yes 118447363
chr1 208443357 208443361 YY1 TRANSFAC yes 34913249
chr1 208443357 208443361 YY1 TRANSFAC yes 118447364
chr1 208443367 208443382 MEF2C JASPAR yes 34913250
chr1 208443367 208443382 MEF2C JASPAR yes 118447365
chr1 208443390 208443394 NFE TRANSFAC yes 34913251
chr1 208443390 208443394 NFE TRANSFAC yes 118447366
chr1 208443390 208443405 FOXP1 JASPAR yes 34913252
chr1 208443390 208443405 FOXP1 JASPAR yes 118447367
chr1 208443408 208443412 H4TF2 TRANSFAC yes 34913253
chr1 208443408 208443412 H4TF2 TRANSFAC yes 118447368
chr1 208443408 208443421 SCRT2 JASPAR yes 34913254
chr1 208443408 208443421 SCRT2 JASPAR yes 118447369
SNP sites on vista4874[chr1:208443226-208443424]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 208443235 rs74155253 T C
NFY ZBED1
900079
chr1 208443236 rs58474045 T C
NFY ZBED1
900080
chr1 208443280 rs572145962 C A
YY1
900081
chr1 208443303 rs564024696 G A no 900082
chr1 208443372 rs1664231 A C,G,T
MEF2C
900083
Genes possibly regulated by vista4874[chr1:208443226-208443424]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 208195587 208417665 - PLXNA2 ENSG00000076356.6 208417665 0.81 0.98 1804 74439
Expression level of Genes
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miRNAs possibly regulated by vista4874[chr1:208443226-208443424]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 1.2943972876336303e-06 0.947205 0.692021 121
Expression level of miRNAs
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