EnhancerDB
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  3. vista4880[chr1:208742557-208742952]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4880[chr1:208742557-208742952]
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Tissue distribution of vista4880
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Transcription factor that possibly regulate vista4880[chr1:208742557-208742952]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 208742565 208742586 ZNF263 JASPAR yes 118447508
chr1 208742603 208742606 MYB TRANSFAC yes 118447509
chr1 208742642 208742650 TBX5 JASPAR yes 118447510
chr1 208742649 208742654 GATA2 JASPAR yes 118447511
chr1 208742684 208742689 TFAP2A TRANSFAC yes 118447512
chr1 208742684 208742690 MZF1 JASPAR yes 118447513
chr1 208742706 208742717 ESRRA JASPAR yes 118447514
chr1 208742710 208742714 ESR1 TRANSFAC yes 118447515
chr1 208742719 208742734 MAFK JASPAR yes 118447516
chr1 208742723 208742734 NRL JASPAR yes 118447517
chr1 208742730 208742741 FOSL2 JASPAR yes 118447518
chr1 208742731 208742742 FOS JASPAR yes 118447519
chr1 208742732 208742743 NFE2L2 JASPAR yes 118447520
chr1 208742740 208742758 NR3C1 JASPAR yes 118447521
chr1 208742782 208742787 SP1 TRANSFAC yes 118447522
chr1 208742790 208742795 ETS2 TRANSFAC yes 118447523
chr1 208742812 208742816 LFA1 TRANSFAC yes 118447524
chr1 208742854 208742866 TFAP2A JASPAR yes 118447525
chr1 208742854 208742866 TFAP2B JASPAR yes 118447526
chr1 208742854 208742866 TFAP2C JASPAR yes 118447527
chr1 208742854 208742869 TFAP2A JASPAR yes 118447528
chr1 208742855 208742866 TFAP2B JASPAR yes 118447529
chr1 208742878 208742887 SNAI2 JASPAR yes 118447530
chr1 208742878 208742888 FIGLA JASPAR yes 118447531
chr1 208742878 208742888 ID4 JASPAR yes 118447532
chr1 208742878 208742888 TCF3 JASPAR yes 118447533
chr1 208742878 208742888 TCF4 JASPAR yes 118447534
chr1 208742880 208742889 ZEB1 JASPAR yes 118447535
chr1 208742887 208742903 SOX8 JASPAR yes 118447536
chr1 208742893 208742898 GATA2 JASPAR yes 118447537
chr1 208742903 208742911 HOXA5 JASPAR yes 118447538
chr1 208742930 208742942 PKNOX1 JASPAR yes 118447539
chr1 208742930 208742942 PKNOX2 JASPAR yes 118447540
chr1 208742930 208742942 TGIF1 JASPAR yes 118447541
chr1 208742930 208742942 TGIF2 JASPAR yes 118447542
SNP sites on vista4880[chr1:208742557-208742952]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 208742689 rs74459925 G A
MZF1 TFAP2A
901343
chr1 208742698 rs112462910 G A no 901344
chr1 208742743 rs532448492 G A
NFE2L2 NR3C1
901345
chr1 208742916 rs530082536 A T no 901346
chr1 208742919 rs143060845 T G no 901347
Genes possibly regulated by vista4880[chr1:208742557-208742952]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4880[chr1:208742557-208742952]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 1.745380414388218e-06 0.947205 0.692021 121
Expression level of miRNAs
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