EnhancerDB
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  3. vista4885[chr1:209331001-209331148]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4885[chr1:209331001-209331148]
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Tissue distribution of vista4885
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Transcription factor that possibly regulate vista4885[chr1:209331001-209331148]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209331009 209331012 MYB TRANSFAC yes 34953936
chr1 209331009 209331012 MYB TRANSFAC yes 118447687
chr1 209331013 209331023 TBX21 JASPAR yes 34953937
chr1 209331013 209331023 TBX21 JASPAR yes 118447688
chr1 209331013 209331024 TBX2 JASPAR yes 34953938
chr1 209331013 209331024 TBX2 JASPAR yes 118447689
chr1 209331026 209331036 BHLHE22 JASPAR yes 34953939
chr1 209331026 209331036 NEUROD2 JASPAR yes 34953940
chr1 209331026 209331036 OLIG2 JASPAR yes 34953941
chr1 209331026 209331036 BHLHE22 JASPAR yes 118447690
chr1 209331026 209331036 NEUROD2 JASPAR yes 118447691
chr1 209331026 209331036 OLIG2 JASPAR yes 118447692
chr1 209331046 209331061 ZIC3 JASPAR yes 34953942
chr1 209331046 209331061 ZIC4 JASPAR yes 34953943
chr1 209331046 209331061 ZIC3 JASPAR yes 118447693
chr1 209331046 209331061 ZIC4 JASPAR yes 118447694
chr1 209331047 209331061 ZIC1 JASPAR yes 34953944
chr1 209331047 209331061 ZIC1 JASPAR yes 118447695
chr1 209331067 209331085 RARA JASPAR yes 34953945
chr1 209331067 209331085 RARA JASPAR yes 118447696
chr1 209331079 209331092 POU2F2 JASPAR yes 34953946
chr1 209331079 209331092 POU2F2 JASPAR yes 118447697
chr1 209331079 209331093 POU1F1 JASPAR yes 34953947
chr1 209331079 209331093 POU1F1 JASPAR yes 118447698
chr1 209331080 209331089 POU2F1 TRANSFAC yes 34953948
chr1 209331080 209331089 POU2F1 TRANSFAC yes 118447699
chr1 209331080 209331092 POU3F1 JASPAR yes 34953949
chr1 209331080 209331092 POU3F2 JASPAR yes 34953950
chr1 209331080 209331092 POU3F1 JASPAR yes 118447700
chr1 209331080 209331092 POU3F2 JASPAR yes 118447701
chr1 209331080 209331093 POU3F3 JASPAR yes 34953951
chr1 209331080 209331093 POU3F3 JASPAR yes 118447702
chr1 209331082 209331089 POU2F1 TRANSFAC yes 34953952
chr1 209331082 209331089 POU2F2C TRANSFAC yes 34953953
chr1 209331082 209331089 POU2F2 TRANSFAC yes 34953954
chr1 209331082 209331089 POU2F1 TRANSFAC yes 118447703
chr1 209331082 209331089 POU2F2C TRANSFAC yes 118447704
chr1 209331082 209331089 POU2F2 TRANSFAC yes 118447705
chr1 209331082 209331090 POU2F1 TRANSFAC yes 34953955
chr1 209331082 209331090 POU2F1 TRANSFAC yes 118447706
chr1 209331082 209331091 POU3F4 JASPAR yes 34953956
chr1 209331082 209331091 POU5F1B JASPAR yes 34953957
chr1 209331082 209331091 POU3F4 JASPAR yes 118447707
chr1 209331082 209331091 POU5F1B JASPAR yes 118447708
chr1 209331097 209331118 ZNF263 JASPAR yes 34953958
chr1 209331097 209331118 ZNF263 JASPAR yes 118447709
chr1 209331105 209331126 IRF1 JASPAR yes 34953959
chr1 209331105 209331126 IRF1 JASPAR yes 118447710
chr1 209331117 209331123 TCF4 TRANSFAC yes 34953960
chr1 209331117 209331123 TCF4 TRANSFAC yes 118447711
chr1 209331133 209331138 H4TF1 TRANSFAC yes 34953961
chr1 209331133 209331138 H4TF1 TRANSFAC yes 118447712
chr1 209331142 209331148 MZF1 JASPAR yes 34953962
chr1 209331142 209331148 MZF1 JASPAR yes 118447713
SNP sites on vista4885[chr1:209331001-209331148]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209331069 rs1933599 A G
RARA
904176
Genes possibly regulated by vista4885[chr1:209331001-209331148]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4885[chr1:209331001-209331148]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 5.533187134233275e-06 0.947205 0.692021 121
Expression level of miRNAs
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