EnhancerDB
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  3. vista4888[chr1:209528830-209529176]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4888[chr1:209528830-209529176]
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Tissue distribution of vista4888
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Transcription factor that possibly regulate vista4888[chr1:209528830-209529176]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209528637 209529320 POLR2A UCSC Txn Factor no Conserved 107865631
chr1 209528696 209529078 STAT3 UCSC Txn Factor no Conserved 107865632
chr1 209528731 209528970 STAT1 UCSC Txn Factor no Conserved 107865633
chr1 209528817 209528830 ATF4 JASPAR yes 34966440
chr1 209528817 209528830 ATF4 JASPAR yes 118447783
chr1 209528824 209528841 BCL6B JASPAR yes 34966441
chr1 209528824 209528841 BCL6B JASPAR yes 118447784
chr1 209528825 209528840 STAT1 JASPAR yes 34966442
chr1 209528825 209528840 STAT1 JASPAR yes 118447785
chr1 209528826 209528844 SRF JASPAR yes 34966443
chr1 209528826 209528844 SRF JASPAR yes 118447786
chr1 209528827 209528838 STAT1 JASPAR yes 34966444
chr1 209528827 209528838 STAT3 JASPAR yes 34966445
chr1 209528827 209528838 STAT1 JASPAR yes 118447787
chr1 209528827 209528838 STAT3 JASPAR yes 118447788
chr1 209528844 209528848 NFE TRANSFAC yes 34966446
chr1 209528844 209528848 NFE TRANSFAC yes 118447789
chr1 209528855 209528874 REST JASPAR yes 34966447
chr1 209528855 209528874 REST JASPAR yes 118447790
chr1 209528864 209528875 NRL JASPAR yes 34966448
chr1 209528864 209528875 NRL JASPAR yes 118447791
chr1 209528875 209528889 TLX1 JASPAR yes 34966449
chr1 209528875 209528889 TLX1 JASPAR yes 118447792
chr1 209528878 209528893 NFYB JASPAR yes 34966450
chr1 209528878 209528893 NFYB JASPAR yes 118447793
chr1 209528880 209528896 NFYA JASPAR yes 34966451
chr1 209528880 209528896 NFYA JASPAR yes 118447794
chr1 209528881 209528899 NFYA JASPAR yes 34966452
chr1 209528881 209528899 NFYA JASPAR yes 118447795
chr1 209528885 209528889 H1TF2 TRANSFAC yes 34966453
chr1 209528885 209528889 NFE TRANSFAC yes 34966454
chr1 209528885 209528889 SRF TRANSFAC yes 34966455
chr1 209528885 209528889 H1TF2 TRANSFAC yes 118447796
chr1 209528885 209528889 NFE TRANSFAC yes 118447797
chr1 209528885 209528889 SRF TRANSFAC yes 118447798
chr1 209528889 209528901 TGIF1 JASPAR yes 34966456
chr1 209528889 209528901 TGIF2 JASPAR yes 34966457
chr1 209528889 209528901 TGIF1 JASPAR yes 118447799
chr1 209528889 209528901 TGIF2 JASPAR yes 118447800
chr1 209528892 209528907 STAT2 JASPAR yes 34966458
chr1 209528892 209528907 STAT2 JASPAR yes 118447801
chr1 209528893 209528907 STAT1 JASPAR yes 34966459
chr1 209528893 209528907 STAT1 JASPAR yes 118447802
chr1 209528904 209528912 EHF JASPAR yes 34966460
chr1 209528904 209528912 EHF JASPAR yes 118447803
chr1 209528904 209528925 ZNF263 JASPAR yes 34966461
chr1 209528904 209528925 ZNF263 JASPAR yes 118447804
chr1 209528906 209528911 ETS2 TRANSFAC yes 34966462
chr1 209528906 209528911 ETS2 TRANSFAC yes 118447805
chr1 209528907 209528922 STAT1 JASPAR yes 34966463
chr1 209528907 209528922 STAT1 JASPAR yes 118447806
chr1 209528909 209528920 STAT1 JASPAR yes 34966464
chr1 209528909 209528920 STAT1 JASPAR yes 118447807
chr1 209528917 209528932 TFAP2C JASPAR yes 34966465
chr1 209528917 209528932 TFAP2C JASPAR yes 118447808
chr1 209528920 209528931 EBF1 JASPAR yes 34966466
chr1 209528920 209528931 EBF1 JASPAR yes 118447809
chr1 209528926 209528947 ZNF263 JASPAR yes 34966467
chr1 209528926 209528947 ZNF263 JASPAR yes 118447810
chr1 209528929 209528950 ZNF263 JASPAR yes 34966468
chr1 209528929 209528950 ZNF263 JASPAR yes 118447811
chr1 209528937 209528958 ZNF263 JASPAR yes 34966469
chr1 209528937 209528958 ZNF263 JASPAR yes 118447812
chr1 209528959 209528969 HOXD13 JASPAR yes 34966470
chr1 209528959 209528969 HOXD13 JASPAR yes 118447813
chr1 209528959 209528970 HOXA10 JASPAR yes 34966471
chr1 209528959 209528970 HOXA10 JASPAR yes 118447814
chr1 209528960 209528970 ALX3 JASPAR yes 34966472
chr1 209528960 209528970 GSX1 JASPAR yes 34966473
chr1 209528960 209528970 GSX2 JASPAR yes 34966474
chr1 209528960 209528970 HOXB2 JASPAR yes 34966475
chr1 209528960 209528970 HOXB3 JASPAR yes 34966476
chr1 209528960 209528970 MEOX2 JASPAR yes 34966477
chr1 209528960 209528970 MIXL1 JASPAR yes 34966478
chr1 209528960 209528970 MNX1 JASPAR yes 34966479
chr1 209528960 209528970 ALX3 JASPAR yes 118447815
chr1 209528960 209528970 GSX1 JASPAR yes 118447816
chr1 209528960 209528970 GSX2 JASPAR yes 118447817
chr1 209528960 209528970 HOXB2 JASPAR yes 118447818
chr1 209528960 209528970 HOXB3 JASPAR yes 118447819
chr1 209528960 209528970 MEOX2 JASPAR yes 118447820
chr1 209528960 209528970 MIXL1 JASPAR yes 118447821
chr1 209528960 209528970 MNX1 JASPAR yes 118447822
chr1 209528961 209528969 LMX1A JASPAR yes 34966480
chr1 209528961 209528969 LMX1B JASPAR yes 34966481
chr1 209528961 209528969 NKX6-1 JASPAR yes 34966482
chr1 209528961 209528969 NKX6-2 JASPAR yes 34966483
chr1 209528961 209528969 PDX1 JASPAR yes 34966484
chr1 209528961 209528969 VAX1 JASPAR yes 34966485
chr1 209528961 209528969 VAX2 JASPAR yes 34966486
chr1 209528961 209528969 VSX1 JASPAR yes 34966487
chr1 209528961 209528969 LMX1A JASPAR yes 118447823
chr1 209528961 209528969 LMX1B JASPAR yes 118447824
chr1 209528961 209528969 NKX6-1 JASPAR yes 118447825
chr1 209528961 209528969 NKX6-2 JASPAR yes 118447826
chr1 209528961 209528969 PDX1 JASPAR yes 118447827
chr1 209528961 209528969 VAX1 JASPAR yes 118447828
chr1 209528961 209528969 VAX2 JASPAR yes 118447829
chr1 209528961 209528969 VSX1 JASPAR yes 118447830
chr1 209528961 209528974 DUXA JASPAR yes 34966488
chr1 209528961 209528974 DUXA JASPAR yes 118447831
chr1 209528962 209528973 NFIL3 JASPAR yes 34966489
chr1 209528962 209528973 PHOX2A JASPAR yes 34966490
chr1 209528962 209528973 PROP1 JASPAR yes 34966491
chr1 209528962 209528973 NFIL3 JASPAR yes 118447832
chr1 209528962 209528973 PHOX2A JASPAR yes 118447833
chr1 209528962 209528973 PROP1 JASPAR yes 118447834
chr1 209528963 209528976 ATF4 JASPAR yes 34966492
chr1 209528963 209528976 ATF4 JASPAR yes 118447835
chr1 209528964 209528977 JUN JASPAR yes 34966493
chr1 209528964 209528977 JUN JASPAR yes 118447836
chr1 209528969 209528979 SREBF2 JASPAR yes 34966494
chr1 209528969 209528979 SREBF2 JASPAR yes 118447837
chr1 209528972 209528983 CDX2 JASPAR yes 34966495
chr1 209528972 209528983 CDX2 JASPAR yes 118447838
chr1 209528973 209528985 SRF JASPAR yes 34966496
chr1 209528973 209528985 SRF JASPAR yes 118447839
chr1 209528987 209528999 INSM1 JASPAR yes 34966497
chr1 209528987 209528999 INSM1 JASPAR yes 118447840
chr1 209528997 209529007 MSC JASPAR yes 34966498
chr1 209528997 209529007 MSC JASPAR yes 118447841
chr1 209528998 209529017 REST JASPAR yes 34966499
chr1 209528998 209529017 REST JASPAR yes 118447842
chr1 209529019 209529035 SOX4 JASPAR yes 34966500
chr1 209529019 209529035 SOX4 JASPAR yes 118447843
chr1 209529020 209529032 POU2F1 JASPAR yes 34966501
chr1 209529020 209529032 POU2F1 JASPAR yes 118447844
chr1 209529020 209529033 POU3F3 JASPAR yes 34966502
chr1 209529020 209529033 POU3F3 JASPAR yes 118447845
chr1 209529020 209529034 POU1F1 JASPAR yes 34966503
chr1 209529020 209529034 POU1F1 JASPAR yes 118447846
chr1 209529021 209529033 POU3F1 JASPAR yes 34966504
chr1 209529021 209529033 POU3F2 JASPAR yes 34966505
chr1 209529021 209529033 POU3F1 JASPAR yes 118447847
chr1 209529021 209529033 POU3F2 JASPAR yes 118447848
chr1 209529021 209529034 POU2F2 JASPAR yes 34966506
chr1 209529021 209529034 POU2F2 JASPAR yes 118447849
chr1 209529022 209529031 POU3F4 JASPAR yes 34966507
chr1 209529022 209529031 POU5F1B JASPAR yes 34966508
chr1 209529022 209529031 POU3F4 JASPAR yes 118447850
chr1 209529022 209529031 POU5F1B JASPAR yes 118447851
chr1 209529023 209529030 POU2F1 TRANSFAC yes 34966509
chr1 209529023 209529030 POU2F2 TRANSFAC yes 34966510
chr1 209529023 209529030 POU2F1 TRANSFAC yes 118447852
chr1 209529023 209529030 POU2F2 TRANSFAC yes 118447853
chr1 209529031 209529040 PITX3 JASPAR yes 34966511
chr1 209529031 209529040 PITX3 JASPAR yes 118447854
chr1 209529031 209529041 GSC2 JASPAR yes 34966512
chr1 209529031 209529041 GSC JASPAR yes 34966513
chr1 209529031 209529041 GSC2 JASPAR yes 118447855
chr1 209529031 209529041 GSC JASPAR yes 118447856
chr1 209529032 209529040 OTX1 JASPAR yes 34966514
chr1 209529032 209529040 OTX2 JASPAR yes 34966515
chr1 209529032 209529040 RHOXF1 JASPAR yes 34966516
chr1 209529032 209529040 OTX1 JASPAR yes 118447857
chr1 209529032 209529040 OTX2 JASPAR yes 118447858
chr1 209529032 209529040 RHOXF1 JASPAR yes 118447859
chr1 209529044 209529055 E2F4 JASPAR yes 34966517
chr1 209529044 209529055 E2F6 JASPAR yes 34966518
chr1 209529044 209529055 E2F4 JASPAR yes 118447860
chr1 209529044 209529055 E2F6 JASPAR yes 118447861
chr1 209529045 209529056 E2F1 JASPAR yes 34966519
chr1 209529045 209529056 E2F1 JASPAR yes 118447862
chr1 209529081 209529085 LFA1 TRANSFAC yes 34966520
chr1 209529081 209529085 LFA1 TRANSFAC yes 118447863
chr1 209529132 209529135 MYB TRANSFAC yes 34966521
chr1 209529132 209529135 MYB TRANSFAC yes 118447864
chr1 209529142 209529146 YY1 TRANSFAC yes 34966522
chr1 209529142 209529146 YY1 TRANSFAC yes 118447865
chr1 209529162 209529175 ELF1 JASPAR yes 34966523
chr1 209529162 209529175 ELF1 JASPAR yes 118447866
SNP sites on vista4888[chr1:209528830-209529176]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209528842 rs144963161 C T
POLR2A SRF STAT1 STAT3
905349
chr1 209529020 rs17014346 C A
POLR2A POU1F1 POU2F1 POU3F3 SOX4 STAT3
905350
Genes possibly regulated by vista4888[chr1:209528830-209529176]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4888[chr1:209528830-209529176]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 209605548 209605568 + hsa-miR-205-3p MIMAT0009197 209602164 2.0502306509482317e-05 0.947205 0.692021 121
Expression level of miRNAs
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