EnhancerDB
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  3. vista490[chr1:15786440-15786713]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista490[chr1:15786440-15786713]
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Tissue distribution of vista490
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Transcription factor that possibly regulate vista490[chr1:15786440-15786713]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15786434 15786440 YY1 JASPAR yes 26986907
chr1 15786434 15786440 YY1 JASPAR yes 118236960
chr1 15786439 15786454 FOXP1 JASPAR yes 26986908
chr1 15786439 15786454 FOXP1 JASPAR yes 118236961
chr1 15786440 15786455 FOXP1 JASPAR yes 26986909
chr1 15786440 15786455 FOXP1 JASPAR yes 118236962
chr1 15786441 15786456 FOXP1 JASPAR yes 26986910
chr1 15786441 15786456 FOXP1 JASPAR yes 118236963
chr1 15786442 15786457 FOXP1 JASPAR yes 26986911
chr1 15786442 15786457 FOXP1 JASPAR yes 118236964
chr1 15786442 15786463 IRF1 JASPAR yes 26986912
chr1 15786442 15786463 IRF1 JASPAR yes 118236965
chr1 15786443 15786458 FOXP1 JASPAR yes 26986913
chr1 15786443 15786458 FOXP1 JASPAR yes 118236966
chr1 15786443 15786464 IRF1 JASPAR yes 26986914
chr1 15786443 15786464 IRF1 JASPAR yes 118236967
chr1 15786444 15786459 FOXP1 JASPAR yes 26986915
chr1 15786444 15786459 FOXP1 JASPAR yes 118236968
chr1 15786448 15786463 FOXP1 JASPAR yes 26986916
chr1 15786448 15786463 FOXP1 JASPAR yes 118236969
chr1 15786454 15786469 FOXP1 JASPAR yes 26986917
chr1 15786454 15786469 FOXP1 JASPAR yes 118236970
chr1 15786455 15786466 FOXA1 JASPAR yes 26986918
chr1 15786455 15786466 FOXA1 JASPAR yes 118236971
chr1 15786455 15786470 FOXA1 JASPAR yes 26986919
chr1 15786455 15786470 FOXA1 JASPAR yes 118236972
chr1 15786456 15786468 FOXC2 JASPAR yes 26986920
chr1 15786456 15786468 FOXC2 JASPAR yes 118236973
chr1 15786457 15786469 FOXI1 JASPAR yes 26986921
chr1 15786457 15786469 FOXI1 JASPAR yes 118236974
chr1 15786458 15786473 FOXP1 JASPAR yes 26986922
chr1 15786458 15786473 FOXP1 JASPAR yes 118236975
chr1 15786460 15786480 RREB1 JASPAR yes 26986923
chr1 15786460 15786480 RREB1 JASPAR yes 118236976
chr1 15786461 15786473 FOXI1 JASPAR yes 26986924
chr1 15786461 15786473 FOXI1 JASPAR yes 118236977
chr1 15786461 15786481 RREB1 JASPAR yes 26986925
chr1 15786461 15786481 RREB1 JASPAR yes 118236978
chr1 15786481 15786484 MYB TRANSFAC yes 26986926
chr1 15786481 15786484 MYB TRANSFAC yes 118236979
chr1 15786488 15786500 PBX1 JASPAR yes 26986927
chr1 15786488 15786500 PBX1 JASPAR yes 118236980
chr1 15786497 15786501 YY1 TRANSFAC yes 26986928
chr1 15786497 15786501 YY1 TRANSFAC yes 118236981
chr1 15786502 15786513 PHOX2A JASPAR yes 26986929
chr1 15786502 15786513 PROP1 JASPAR yes 26986930
chr1 15786502 15786513 PHOX2A JASPAR yes 118236982
chr1 15786502 15786513 PROP1 JASPAR yes 118236983
chr1 15786510 15786516 TCF4 TRANSFAC yes 26986931
chr1 15786510 15786516 TCF4 TRANSFAC yes 118236984
chr1 15786543 15786547 NFE TRANSFAC yes 26986932
chr1 15786543 15786547 NFE TRANSFAC yes 118236985
chr1 15786555 15786565 ALX3 JASPAR yes 26986933
chr1 15786555 15786565 EMX1 JASPAR yes 26986934
chr1 15786555 15786565 HOXB2 JASPAR yes 26986935
chr1 15786555 15786565 HOXB3 JASPAR yes 26986936
chr1 15786555 15786565 MEOX2 JASPAR yes 26986937
chr1 15786555 15786565 MNX1 JASPAR yes 26986938
chr1 15786555 15786565 ALX3 JASPAR yes 118236986
chr1 15786555 15786565 EMX1 JASPAR yes 118236987
chr1 15786555 15786565 HOXB2 JASPAR yes 118236988
chr1 15786555 15786565 HOXB3 JASPAR yes 118236989
chr1 15786555 15786565 MEOX2 JASPAR yes 118236990
chr1 15786555 15786565 MNX1 JASPAR yes 118236991
chr1 15786556 15786564 LMX1A JASPAR yes 26986939
chr1 15786556 15786564 LMX1B JASPAR yes 26986940
chr1 15786556 15786564 NKX6-1 JASPAR yes 26986941
chr1 15786556 15786564 NKX6-2 JASPAR yes 26986942
chr1 15786556 15786564 PDX1 JASPAR yes 26986943
chr1 15786556 15786564 VAX1 JASPAR yes 26986944
chr1 15786556 15786564 VAX2 JASPAR yes 26986945
chr1 15786556 15786564 VSX1 JASPAR yes 26986946
chr1 15786556 15786564 LMX1A JASPAR yes 118236992
chr1 15786556 15786564 LMX1B JASPAR yes 118236993
chr1 15786556 15786564 NKX6-1 JASPAR yes 118236994
chr1 15786556 15786564 NKX6-2 JASPAR yes 118236995
chr1 15786556 15786564 PDX1 JASPAR yes 118236996
chr1 15786556 15786564 VAX1 JASPAR yes 118236997
chr1 15786556 15786564 VAX2 JASPAR yes 118236998
chr1 15786556 15786564 VSX1 JASPAR yes 118236999
chr1 15786562 15786576 JUN JASPAR yes 26986947
chr1 15786562 15786576 JUN JASPAR yes 118237000
chr1 15786564 15786575 BATF JASPAR yes 26986948
chr1 15786564 15786575 BATF JASPAR yes 118237001
chr1 15786565 15786576 FOSL2 JASPAR yes 26986949
chr1 15786565 15786576 JUNB JASPAR yes 26986950
chr1 15786565 15786576 FOSL2 JASPAR yes 118237002
chr1 15786565 15786576 JUNB JASPAR yes 118237003
chr1 15786566 15786577 FOS JASPAR yes 26986951
chr1 15786566 15786577 FOSL1 JASPAR yes 26986952
chr1 15786566 15786577 JUND JASPAR yes 26986953
chr1 15786566 15786577 NFE2 JASPAR yes 26986954
chr1 15786566 15786577 FOS JASPAR yes 118237004
chr1 15786566 15786577 FOSL1 JASPAR yes 118237005
chr1 15786566 15786577 JUND JASPAR yes 118237006
chr1 15786566 15786577 NFE2 JASPAR yes 118237007
chr1 15786567 15786576 JDP2 JASPAR yes 26986955
chr1 15786567 15786576 JDP2 JASPAR yes 118237008
chr1 15786567 15786578 FOSL2 JASPAR yes 26986956
chr1 15786567 15786578 JUNB JASPAR yes 26986957
chr1 15786567 15786578 FOSL2 JASPAR yes 118237009
chr1 15786567 15786578 JUNB JASPAR yes 118237010
chr1 15786567 15786581 JUN JASPAR yes 26986958
chr1 15786567 15786581 JUN JASPAR yes 118237011
chr1 15786595 15786605 NEUROG2 JASPAR yes 26986959
chr1 15786595 15786605 NEUROG2 JASPAR yes 118237012
chr1 15786600 15786614 SPI1 JASPAR yes 26986960
chr1 15786600 15786614 SPI1 JASPAR yes 118237013
chr1 15786604 15786610 MZF1 JASPAR yes 26986961
chr1 15786604 15786610 MZF1 JASPAR yes 118237014
chr1 15786608 15786612 YY1 TRANSFAC yes 26986962
chr1 15786608 15786612 YY1 TRANSFAC yes 118237015
chr1 15786608 15786626 SRF JASPAR yes 26986963
chr1 15786608 15786626 SRF JASPAR yes 118237016
chr1 15786648 15786663 TFAP2A JASPAR yes 26986964
chr1 15786648 15786663 TFAP2A JASPAR yes 118237017
chr1 15786651 15786657 MZF1 JASPAR yes 26986965
chr1 15786651 15786657 MZF1 JASPAR yes 118237018
chr1 15786651 15786663 TFAP2A JASPAR yes 26986966
chr1 15786651 15786663 TFAP2B JASPAR yes 26986967
chr1 15786651 15786663 TFAP2C JASPAR yes 26986968
chr1 15786651 15786663 TFAP2A JASPAR yes 118237019
chr1 15786651 15786663 TFAP2B JASPAR yes 118237020
chr1 15786651 15786663 TFAP2C JASPAR yes 118237021
chr1 15786670 15786683 TFAP2A JASPAR yes 26986969
chr1 15786670 15786683 TFAP2B JASPAR yes 26986970
chr1 15786670 15786683 TFAP2C JASPAR yes 26986971
chr1 15786670 15786683 TFAP2A JASPAR yes 118237022
chr1 15786670 15786683 TFAP2B JASPAR yes 118237023
chr1 15786670 15786683 TFAP2C JASPAR yes 118237024
chr1 15786671 15786680 TFAP2A JASPAR yes 26986972
chr1 15786671 15786680 TFAP2A JASPAR yes 118237025
chr1 15786676 15786690 PLAG1 JASPAR yes 26986973
chr1 15786676 15786690 PLAG1 JASPAR yes 118237026
chr1 15786693 15786707 RORA JASPAR yes 26986974
chr1 15786693 15786707 RORA JASPAR yes 118237027
chr1 15786695 15786705 TFCP2 JASPAR yes 26986975
chr1 15786695 15786705 TFCP2 JASPAR yes 118237028
chr1 15786707 15786721 SPIC JASPAR yes 26986976
chr1 15786707 15786721 SPIC JASPAR yes 118237029
SNP sites on vista490[chr1:15786440-15786713]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15786682 rs553308412 C T
PLAG1 TFAP2A TFAP2B TFAP2C
105594
Genes possibly regulated by vista490[chr1:15786440-15786713]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15736391 15756839 + EFHD2 ENSG00000142634.8 15736391 0.81 1.0 205 49951
chr1 15764935 15775737 + CTRC ENSG00000162438.7 15764935 1.0 0.88 206 78495
chr1 15783223 15798586 + CELA2A ENSG00000142615.7 15783223 1.0 1.0 207 96783
chr1 15792404 15817895 + CELA2B ENSG00000215704.5 15792404 1.0 1.0 208 94309
chr1 15817327 15853029 - CASP9 ENSG00000132906.13 15853029 0.85 1.0 209 33684
chr1 15853308 15918874 + DNAJC16 ENSG00000116138.8 15853308 0.81 0.99 210 33405
Expression level of Genes
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miRNAs possibly regulated by vista490[chr1:15786440-15786713]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results