EnhancerDB
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  3. vista4915[chr1:209828801-209829023]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4915[chr1:209828801-209829023]
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Tissue distribution of vista4915
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Transcription factor that possibly regulate vista4915[chr1:209828801-209829023]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209828798 209828809 FOXA1 JASPAR yes 34988112
chr1 209828798 209828809 FOXA1 JASPAR yes 118449152
chr1 209828799 209828811 FOXC2 JASPAR yes 34988113
chr1 209828799 209828811 FOXC2 JASPAR yes 118449153
chr1 209828804 209828813 SOX9 JASPAR yes 34988114
chr1 209828804 209828813 SOX9 JASPAR yes 118449154
chr1 209828809 209828820 DMRT3 JASPAR yes 34988115
chr1 209828809 209828820 DMRT3 JASPAR yes 118449155
chr1 209828882 209828886 LFA1 TRANSFAC yes 34988116
chr1 209828882 209828886 LFA1 TRANSFAC yes 118449156
chr1 209828905 209828915 NFATC3 JASPAR yes 34988117
chr1 209828905 209828915 NFATC3 JASPAR yes 118449157
chr1 209828907 209828917 RELA JASPAR yes 34988118
chr1 209828907 209828917 REL JASPAR yes 34988119
chr1 209828907 209828917 RELA JASPAR yes 118449158
chr1 209828907 209828917 REL JASPAR yes 118449159
chr1 209828907 209828918 NFKB1 JASPAR yes 34988120
chr1 209828907 209828918 NFKB1 JASPAR yes 118449160
chr1 209828927 209828942 NR2C2 JASPAR yes 34988121
chr1 209828927 209828942 NR2C2 JASPAR yes 118449161
chr1 209828954 209828958 NFE TRANSFAC yes 34988122
chr1 209828954 209828958 NFE TRANSFAC yes 118449162
chr1 209828954 209828959 GATA1 TRANSFAC yes 34988123
chr1 209828954 209828959 GATA1 TRANSFAC yes 118449163
chr1 209828954 209828960 GATA3 JASPAR yes 34988124
chr1 209828954 209828960 GATA3 JASPAR yes 118449164
chr1 209828959 209828969 ALX3 JASPAR yes 34988125
chr1 209828959 209828969 ALX3 JASPAR yes 118449165
chr1 209828960 209828964 H1TF2 TRANSFAC yes 34988126
chr1 209828960 209828964 NFE TRANSFAC yes 34988127
chr1 209828960 209828964 SRF TRANSFAC yes 34988128
chr1 209828960 209828964 H1TF2 TRANSFAC yes 118449166
chr1 209828960 209828964 NFE TRANSFAC yes 118449167
chr1 209828960 209828964 SRF TRANSFAC yes 118449168
chr1 209828960 209828968 BSX JASPAR yes 34988129
chr1 209828960 209828968 DLX6 JASPAR yes 34988130
chr1 209828960 209828968 MSX1 JASPAR yes 34988131
chr1 209828960 209828968 MSX2 JASPAR yes 34988132
chr1 209828960 209828968 BSX JASPAR yes 118449169
chr1 209828960 209828968 DLX6 JASPAR yes 118449170
chr1 209828960 209828968 MSX1 JASPAR yes 118449171
chr1 209828960 209828968 MSX2 JASPAR yes 118449172
chr1 209828968 209828974 HiNF-A TRANSFAC yes 34988133
chr1 209828968 209828974 HiNF-A TRANSFAC yes 118449173
chr1 209828974 209828986 YY1 JASPAR yes 34988134
chr1 209828974 209828986 YY1 JASPAR yes 118449174
chr1 209828980 209828991 FOXB1 JASPAR yes 34988135
chr1 209828980 209828991 FOXC1 JASPAR yes 34988136
chr1 209828980 209828991 FOXB1 JASPAR yes 118449175
chr1 209828980 209828991 FOXC1 JASPAR yes 118449176
chr1 209828983 209828990 MEIS1 JASPAR yes 34988137
chr1 209828983 209828990 MEIS1 JASPAR yes 118449177
chr1 209828983 209828991 MEIS2 JASPAR yes 34988138
chr1 209828983 209828991 MEIS2 JASPAR yes 118449178
chr1 209828995 209829016 ZNF263 JASPAR yes 34988139
chr1 209828995 209829016 ZNF263 JASPAR yes 118449179
chr1 209828998 209829019 ZNF263 JASPAR yes 34988140
chr1 209828998 209829019 ZNF263 JASPAR yes 118449180
chr1 209829016 209829027 BATF JASPAR yes 34988141
chr1 209829016 209829027 BATF JASPAR yes 118449181
chr1 209829020 209829035 STAT1 JASPAR yes 34988142
chr1 209829020 209829035 STAT1 JASPAR yes 118449182
chr1 209829020 209829040 TP53 JASPAR yes 34988143
chr1 209829020 209829040 TP53 JASPAR yes 118449183
chr1 209829022 209829033 STAT1 JASPAR yes 34988144
chr1 209829022 209829033 STAT3 JASPAR yes 34988145
chr1 209829022 209829033 STAT1 JASPAR yes 118449184
chr1 209829022 209829033 STAT3 JASPAR yes 118449185
SNP sites on vista4915[chr1:209828801-209829023]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209828824 rs192547925 A T no 908045
chr1 209828864 rs114303401 A G no 908046
chr1 209828912 rs742372 A T
NFATC3 NFKB1 REL RELA
908047
chr1 209828955 rs12126519 C T
GATA1 GATA3 NFE
908048
chr1 209828981 rs547583901 A G
FOXB1 FOXC1 YY1
908049
chr1 209829012 rs143280345 G C
ZNF263
908050
Genes possibly regulated by vista4915[chr1:209828801-209829023]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 209757062 209787283 + CAMK1G ENSG00000008118.5 209757062 0.97 0.98 1805 28261
chr1 209788215 209825811 - LAMB3 ENSG00000196878.8 209825811 0.99 1.0 1806 97010
chr1 209848765 209849733 + G0S2 ENSG00000123689.5 209848765 0.85 0.99 1807 80258
chr1 209859510 209908295 + HSD11B1 ENSG00000117594.5 209859510 0.98 0.87 1808 69513
Expression level of Genes
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miRNAs possibly regulated by vista4915[chr1:209828801-209829023]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results