EnhancerDB
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  3. vista4925[chr1:209921200-209921357]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4925[chr1:209921200-209921357]
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Tissue distribution of vista4925
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Transcription factor that possibly regulate vista4925[chr1:209921200-209921357]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209920956 209921584 CTCF UCSC Txn Factor no Conserved 107866416
chr1 209921006 209921490 RAD21 UCSC Txn Factor no Conserved 107866434
chr1 209921026 209921426 FOS UCSC Txn Factor no Conserved 107866448
chr1 209921033 209921349 EBF1 UCSC Txn Factor no Conserved 107866455
chr1 209921046 209921271 RUNX3 UCSC Txn Factor no Conserved 107866468
chr1 209921099 209921358 JUND UCSC Txn Factor no Conserved 107866494
chr1 209921125 209921373 FOSL2 UCSC Txn Factor no Conserved 107866508
chr1 209921156 209921443 STAT3 UCSC Txn Factor no Conserved 107866516
chr1 209921200 209921212 TFAP2A JASPAR yes 34994536
chr1 209921200 209921212 TFAP2B JASPAR yes 34994537
chr1 209921200 209921212 TFAP2C JASPAR yes 34994538
chr1 209921200 209921212 TFAP2A JASPAR yes 118449685
chr1 209921200 209921212 TFAP2B JASPAR yes 118449686
chr1 209921200 209921212 TFAP2C JASPAR yes 118449687
chr1 209921202 209921211 TFAP2A JASPAR yes 34994539
chr1 209921202 209921211 TFAP2A JASPAR yes 118449688
chr1 209921206 209921212 SP1 TRANSFAC yes 34994540
chr1 209921206 209921212 SP1 TRANSFAC yes 118449689
chr1 209921207 209921212 SP1 TRANSFAC yes 34994541
chr1 209921207 209921212 SP1 TRANSFAC yes 118449690
chr1 209921215 209921225 FIGLA JASPAR yes 34994542
chr1 209921215 209921225 TCF3 JASPAR yes 34994543
chr1 209921215 209921225 FIGLA JASPAR yes 118449691
chr1 209921215 209921225 TCF3 JASPAR yes 118449692
chr1 209921216 209921225 SNAI2 JASPAR yes 34994544
chr1 209921216 209921225 SNAI2 JASPAR yes 118449693
chr1 209921217 209921222 USF2 TRANSFAC yes 34994545
chr1 209921217 209921222 USF2 TRANSFAC yes 118449694
chr1 209921237 209921251 JUN JASPAR yes 34994546
chr1 209921237 209921251 JUN JASPAR yes 118449695
chr1 209921240 209921251 FOSL2 JASPAR yes 34994547
chr1 209921240 209921251 JUNB JASPAR yes 34994548
chr1 209921240 209921251 FOSL2 JASPAR yes 118449696
chr1 209921240 209921251 JUNB JASPAR yes 118449697
chr1 209921241 209921252 FOS JASPAR yes 34994549
chr1 209921241 209921252 FOSL1 JASPAR yes 34994550
chr1 209921241 209921252 JUND JASPAR yes 34994551
chr1 209921241 209921252 NFE2 JASPAR yes 34994552
chr1 209921241 209921252 FOS JASPAR yes 118449698
chr1 209921241 209921252 FOSL1 JASPAR yes 118449699
chr1 209921241 209921252 JUND JASPAR yes 118449700
chr1 209921241 209921252 NFE2 JASPAR yes 118449701
chr1 209921242 209921251 JDP2 JASPAR yes 34994553
chr1 209921242 209921251 JDP2 JASPAR yes 118449702
chr1 209921242 209921253 FOSL2 JASPAR yes 34994554
chr1 209921242 209921253 JUNB JASPAR yes 34994555
chr1 209921242 209921253 FOSL2 JASPAR yes 118449703
chr1 209921242 209921253 JUNB JASPAR yes 118449704
chr1 209921242 209921256 JUN JASPAR yes 34994556
chr1 209921242 209921256 JUN JASPAR yes 118449705
chr1 209921243 209921254 BATF JASPAR yes 34994557
chr1 209921243 209921254 BATF JASPAR yes 118449706
chr1 209921257 209921274 RARA JASPAR yes 34994558
chr1 209921257 209921274 RARA JASPAR yes 118449707
chr1 209921268 209921278 RORA JASPAR yes 34994559
chr1 209921268 209921278 RORA JASPAR yes 118449708
chr1 209921274 209921284 SP1 JASPAR yes 34994560
chr1 209921274 209921284 SP1 JASPAR yes 118449709
chr1 209921276 209921281 SP1 TRANSFAC yes 34994561
chr1 209921276 209921281 SP1 TRANSFAC yes 118449710
chr1 209921277 209921282 SP1 TRANSFAC yes 34994562
chr1 209921277 209921282 SP1 TRANSFAC yes 118449711
chr1 209921277 209921283 SP1 TRANSFAC yes 34994563
chr1 209921277 209921283 SP1 TRANSFAC yes 118449712
chr1 209921302 209921305 MYB TRANSFAC yes 34994564
chr1 209921302 209921305 MYB TRANSFAC yes 118449713
chr1 209921307 209921312 SP1 TRANSFAC yes 34994565
chr1 209921307 209921312 SP1 TRANSFAC yes 118449714
chr1 209921320 209921325 SP1 TRANSFAC yes 34994566
chr1 209921320 209921325 SP1 TRANSFAC yes 118449715
chr1 209921331 209921337 NFIC JASPAR yes 34994567
chr1 209921331 209921337 NFIC JASPAR yes 118449716
chr1 209921331 209921345 TLX1 JASPAR yes 34994568
chr1 209921331 209921345 TLX1 JASPAR yes 118449717
chr1 209921345 209921350 TFAP2A TRANSFAC yes 34994569
chr1 209921345 209921350 TFAP2A TRANSFAC yes 118449718
chr1 209921345 209921351 MZF1 JASPAR yes 34994570
chr1 209921345 209921351 MZF1 JASPAR yes 118449719
chr1 209921356 209921362 PTF TRANSFAC yes 34994571
chr1 209921356 209921362 PTF TRANSFAC yes 118449720
SNP sites on vista4925[chr1:209921200-209921357]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209921209 rs111989153 G C
CTCF EBF1 FOS FOSL2 JUND RAD21 RUNX3 SP1 STAT3 TFAP2A TFAP2B TFAP2C
908717
chr1 209921262 rs563878723 C T
CTCF EBF1 FOS FOSL2 JUND RAD21 RARA RUNX3 STAT3
908718
Genes possibly regulated by vista4925[chr1:209921200-209921357]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 209788215 209825811 - LAMB3 ENSG00000196878.8 209825811 0.99 1.0 1806 4611
chr1 209848765 209849733 + G0S2 ENSG00000123689.5 209848765 0.85 0.99 1807 27565
chr1 209859510 209908295 + HSD11B1 ENSG00000117594.5 209859510 0.98 0.87 1808 38310
chr1 209929377 209955668 + TRAF3IP3 ENSG00000009790.10 209929377 0.93 1.0 1809 91980
chr1 209955661 209957904 - C1orf74 ENSG00000162757.3 209957904 0.97 1.0 1810 63453
chr1 209959036 209979465 - IRF6 ENSG00000117595.6 209979465 0.97 1.0 1811 41892
chr1 210001352 210030910 + DIEXF ENSG00000117597.13 210001352 0.62 0.99 1812 20005
Expression level of Genes
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miRNAs possibly regulated by vista4925[chr1:209921200-209921357]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results