EnhancerDB
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  3. vista4930[chr1:209942657-209943400]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4930[chr1:209942657-209943400]
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Tissue distribution of vista4930
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Transcription factor that possibly regulate vista4930[chr1:209942657-209943400]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 209942773 209943144 RUNX3 UCSC Txn Factor no Conserved 107866584
chr1 209942664 209942676 TEAD1 JASPAR yes 118449932
chr1 209942666 209942676 TEAD1 JASPAR yes 118449933
chr1 209942666 209942676 TEAD4 JASPAR yes 118449934
chr1 209942667 209942675 TEAD3 JASPAR yes 118449935
chr1 209942689 209942703 TCF7L2 JASPAR yes 118449936
chr1 209942693 209942699 TCF1 TRANSFAC yes 118449937
chr1 209942693 209942700 TCF4 TRANSFAC yes 118449938
chr1 209942716 209942722 SOX10 JASPAR yes 118449939
chr1 209942718 209942732 XBP1 JASPAR yes 118449940
chr1 209942719 209942733 CREB3 JASPAR yes 118449941
chr1 209942736 209942740 H4TF2 TRANSFAC yes 118449942
chr1 209942762 209942772 NFIA JASPAR yes 118449943
chr1 209942764 209942770 NFIC JASPAR yes 118449944
chr1 209942774 209942781 JUN TRANSFAC yes 118449945
chr1 209942791 209942801 TFEC JASPAR yes 118449946
chr1 209942808 209942821 HNF1B JASPAR yes 118449947
chr1 209942814 209942818 YY1 TRANSFAC yes 118449948
chr1 209942835 209942841 TBP TRANSFAC yes 118449949
chr1 209942839 209942854 MEF2A JASPAR yes 118449950
chr1 209942840 209942855 MEF2C JASPAR yes 118449951
chr1 209942841 209942853 MEF2A JASPAR yes 118449952
chr1 209942841 209942853 MEF2B JASPAR yes 118449953
chr1 209942841 209942853 MEF2D JASPAR yes 118449954
chr1 209942842 209942852 MEF2A JASPAR yes 118449955
chr1 209942843 209942847 YY1 TRANSFAC yes 118449956
chr1 209942846 209942856 NFIA JASPAR yes 118449957
chr1 209942847 209942856 NFIX JASPAR yes 118449958
chr1 209942848 209942854 NFIC JASPAR yes 118449959
chr1 209942854 209942867 SCRT2 JASPAR yes 118449960
chr1 209942874 209942886 NHLH1 JASPAR yes 118449961
chr1 209942875 209942885 NHLH1 JASPAR yes 118449962
chr1 209942881 209942887 JUN TRANSFAC yes 118449963
chr1 209942885 209942888 MYB TRANSFAC yes 118449964
chr1 209942886 209942899 ELF1 JASPAR yes 118449965
chr1 209942889 209942899 GABPA JASPAR yes 118449966
chr1 209942889 209942900 ELK4 JASPAR yes 118449967
chr1 209942889 209942900 FLI1 JASPAR yes 118449968
chr1 209942904 209942909 SP1 TRANSFAC yes 118449969
chr1 209942907 209942920 NFKB1 JASPAR yes 118449970
chr1 209942907 209942920 NFKB2 JASPAR yes 118449971
chr1 209942908 209942919 NFKB1 JASPAR yes 118449972
chr1 209942909 209942913 LFA1 TRANSFAC yes 118449973
chr1 209942912 209942924 INSM1 JASPAR yes 118449974
chr1 209942949 209942963 TCF7L2 JASPAR yes 118449975
chr1 209942949 209942964 LEF1 JASPAR yes 118449976
chr1 209942976 209942987 ELK4 JASPAR yes 118449977
chr1 209942976 209942987 FLI1 JASPAR yes 118449978
chr1 209942977 209942987 ERF JASPAR yes 118449979
chr1 209942977 209942987 ETS1 JASPAR yes 118449980
chr1 209942977 209942987 ETV6 JASPAR yes 118449981
chr1 209942977 209942987 GABPA JASPAR yes 118449982
chr1 209942977 209942990 ELF1 JASPAR yes 118449983
chr1 209942978 209942985 SPI1 JASPAR yes 118449984
chr1 209942978 209942986 EHF JASPAR yes 118449985
chr1 209942978 209942986 FEV JASPAR yes 118449986
chr1 209943018 209943023 SP1 TRANSFAC yes 118449987
chr1 209943018 209943030 HINFP JASPAR yes 118449988
chr1 209943039 209943045 SP1 TRANSFAC yes 118449989
chr1 209943039 209943049 SP1 JASPAR yes 118449990
chr1 209943048 209943060 INSM1 JASPAR yes 118449991
chr1 209943059 209943063 YY1 TRANSFAC yes 118449992
chr1 209943064 209943077 ELF1 JASPAR yes 118449993
chr1 209943064 209943080 SOX4 JASPAR yes 118449994
chr1 209943065 209943075 ELK1 JASPAR yes 118449995
chr1 209943065 209943077 EHF JASPAR yes 118449996
chr1 209943065 209943077 ELF1 JASPAR yes 118449997
chr1 209943065 209943077 ELF4 JASPAR yes 118449998
chr1 209943065 209943078 ELF3 JASPAR yes 118449999
chr1 209943066 209943077 ELF5 JASPAR yes 118450000
chr1 209943066 209943077 ETV2 JASPAR yes 118450001
chr1 209943066 209943077 SPDEF JASPAR yes 118450002
chr1 209943067 209943076 ELK4 JASPAR yes 118450003
chr1 209943067 209943077 ELK1 JASPAR yes 118450004
chr1 209943067 209943077 ELK3 JASPAR yes 118450005
chr1 209943067 209943077 ERF JASPAR yes 118450006
chr1 209943067 209943077 ERG JASPAR yes 118450007
chr1 209943067 209943077 ETS1 JASPAR yes 118450008
chr1 209943067 209943077 ETV1 JASPAR yes 118450009
chr1 209943067 209943077 ETV3 JASPAR yes 118450010
chr1 209943067 209943077 ETV4 JASPAR yes 118450011
chr1 209943067 209943077 ETV5 JASPAR yes 118450012
chr1 209943067 209943077 ETV6 JASPAR yes 118450013
chr1 209943067 209943077 FEV JASPAR yes 118450014
chr1 209943067 209943077 FLI1 JASPAR yes 118450015
chr1 209943067 209943078 ELK4 JASPAR yes 118450016
chr1 209943067 209943078 FLI1 JASPAR yes 118450017
chr1 209943068 209943076 FEV JASPAR yes 118450018
chr1 209943069 209943075 ETS1 JASPAR yes 118450019
chr1 209943078 209943082 TEAD2 TRANSFAC yes 118450020
chr1 209943083 209943101 NR3C1 JASPAR yes 118450021
chr1 209943098 209943110 TAL1 JASPAR yes 118450022
chr1 209943100 209943106 YY1 JASPAR yes 118450023
chr1 209943100 209943110 NEUROG2 JASPAR yes 118450024
chr1 209943129 209943148 REST JASPAR yes 118450025
chr1 209943145 209943155 TEAD4 JASPAR yes 118450026
chr1 209943175 209943182 E2F1 TRANSFAC yes 118450027
chr1 209943184 209943194 NFATC3 JASPAR yes 118450028
chr1 209943186 209943193 NFATC2 JASPAR yes 118450029
chr1 209943187 209943202 HSF1 JASPAR yes 118450030
chr1 209943204 209943210 GATA3 JASPAR yes 118450031
chr1 209943211 209943223 GRHL1 JASPAR yes 118450032
chr1 209943212 209943222 TFCP2 JASPAR yes 118450033
chr1 209943217 209943221 ESR1 TRANSFAC yes 118450034
chr1 209943234 209943241 NFATC2 JASPAR yes 118450035
chr1 209943253 209943259 YY1 JASPAR yes 118450036
chr1 209943256 209943277 ZNF263 JASPAR yes 118450037
chr1 209943261 209943271 SP1 JASPAR yes 118450038
chr1 209943263 209943268 SP1 TRANSFAC yes 118450039
chr1 209943263 209943269 SP1 TRANSFAC yes 118450040
chr1 209943263 209943270 SP1 TRANSFAC yes 118450041
chr1 209943264 209943279 NR2C2 JASPAR yes 118450042
chr1 209943265 209943275 SP1 TRANSFAC yes 118450043
chr1 209943266 209943276 SP1 JASPAR yes 118450044
chr1 209943267 209943273 SP1 TRANSFAC yes 118450045
chr1 209943267 209943277 SP1 JASPAR yes 118450046
chr1 209943285 209943305 RREB1 JASPAR yes 118450047
chr1 209943330 209943334 LFA1 TRANSFAC yes 118450048
chr1 209943339 209943343 LFA1 TRANSFAC yes 118450049
chr1 209943349 209943355 SOX10 JASPAR yes 118450050
chr1 209943354 209943360 MAZ TRANSFAC yes 118450051
chr1 209943376 209943381 ETS2 TRANSFAC yes 118450052
SNP sites on vista4930[chr1:209942657-209943400]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 209942691 rs142285806 T TA
TCF7L2
908911
chr1 209942771 rs181123721 A T
NFIA
908912
chr1 209942783 rs115762092 C G
RUNX3
908913
chr1 209942861 rs139124462 T G
RUNX3 SCRT2
908914
chr1 209942911 rs144034763 G A
LFA1 NFKB1 NFKB2 RUNX3
908915
chr1 209942976 rs558857906 A C
ELK4 FLI1 RUNX3
908916
chr1 209943022 rs146467141 C G
HINFP RUNX3 SP1
908917
chr1 209943156 rs11119343 A G no 908918
Genes possibly regulated by vista4930[chr1:209942657-209943400]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 209848765 209849733 + G0S2 ENSG00000123689.5 209848765 0.85 0.99 1807 6108
chr1 209859510 209908295 + HSD11B1 ENSG00000117594.5 209859510 0.98 0.87 1808 16853
chr1 209929377 209955668 + TRAF3IP3 ENSG00000009790.10 209929377 0.93 1.0 1809 86720
chr1 209955661 209957904 - C1orf74 ENSG00000162757.3 209957904 0.97 1.0 1810 85496
chr1 209959036 209979465 - IRF6 ENSG00000117595.6 209979465 0.97 1.0 1811 63935
chr1 210001352 210030910 + DIEXF ENSG00000117597.13 210001352 0.62 0.99 1812 42048
Expression level of Genes
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miRNAs possibly regulated by vista4930[chr1:209942657-209943400]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results