EnhancerDB
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  3. vista49477[chr5:145236184-145236553]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49477[chr5:145236184-145236553]
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Tissue distribution of vista49477
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Transcription factor that possibly regulate vista49477[chr5:145236184-145236553]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 145236219 145236233 ZIC1 JASPAR yes 66626963
chr5 145236219 145236233 ZIC1 JASPAR yes 70730719
chr5 145236219 145236234 ZIC4 JASPAR yes 66626964
chr5 145236219 145236234 ZIC4 JASPAR yes 70730720
chr5 145236220 145236228 WT1 TRANSFAC yes 66626965
chr5 145236220 145236228 WT1 TRANSFAC yes 70730721
chr5 145236223 145236229 SP1 TRANSFAC yes 66626966
chr5 145236223 145236229 SP1 TRANSFAC yes 70730722
chr5 145236239 145236257 NR3C1 JASPAR yes 66626967
chr5 145236239 145236257 NR3C1 JASPAR yes 70730723
chr5 145236245 145236260 PRDM1 JASPAR yes 66626968
chr5 145236245 145236260 PRDM1 JASPAR yes 70730724
chr5 145236255 145236269 BATF3 JASPAR yes 66626969
chr5 145236255 145236269 BATF3 JASPAR yes 70730725
chr5 145236256 145236268 PROX1 JASPAR yes 66626970
chr5 145236256 145236268 PROX1 JASPAR yes 70730726
chr5 145236258 145236266 CREB1 JASPAR yes 66626971
chr5 145236258 145236266 CREB1 JASPAR yes 70730727
chr5 145236259 145236271 CREB1 JASPAR yes 66626972
chr5 145236259 145236271 CREB1 JASPAR yes 70730728
chr5 145236260 145236265 ATF1 TRANSFAC yes 66626973
chr5 145236260 145236265 ATF1 TRANSFAC yes 70730729
chr5 145236275 145236279 NFE TRANSFAC yes 66626974
chr5 145236275 145236279 NFE TRANSFAC yes 70730730
chr5 145236276 145236293 RXRA JASPAR yes 66626975
chr5 145236276 145236293 RXRA JASPAR yes 70730731
chr5 145236323 145236329 TCF1 TRANSFAC yes 66626976
chr5 145236323 145236329 TCF1 TRANSFAC yes 70730732
chr5 145236358 145236362 YY1 TRANSFAC yes 66626977
chr5 145236358 145236362 YY1 TRANSFAC yes 70730733
chr5 145236365 145236376 FOXA1 JASPAR yes 66626978
chr5 145236365 145236376 FOXA1 JASPAR yes 70730734
chr5 145236368 145236375 SPIB JASPAR yes 66626979
chr5 145236368 145236375 SPIB JASPAR yes 70730735
chr5 145236380 145236385 GATA2 JASPAR yes 66626980
chr5 145236380 145236385 GATA2 JASPAR yes 70730736
chr5 145236440 145236453 EOMES JASPAR yes 66626981
chr5 145236440 145236453 EOMES JASPAR yes 70730737
chr5 145236442 145236453 TBX2 JASPAR yes 66626982
chr5 145236442 145236453 TBX2 JASPAR yes 70730738
chr5 145236443 145236453 TBX21 JASPAR yes 66626983
chr5 145236443 145236453 TBX21 JASPAR yes 70730739
chr5 145236444 145236452 TBX15 JASPAR yes 66626984
chr5 145236444 145236452 TBX1 JASPAR yes 66626985
chr5 145236444 145236452 TBX4 JASPAR yes 66626986
chr5 145236444 145236452 TBX5 JASPAR yes 66626987
chr5 145236444 145236452 TBX15 JASPAR yes 70730740
chr5 145236444 145236452 TBX1 JASPAR yes 70730741
chr5 145236444 145236452 TBX4 JASPAR yes 70730742
chr5 145236444 145236452 TBX5 JASPAR yes 70730743
chr5 145236445 145236455 MSC JASPAR yes 66626988
chr5 145236445 145236455 MSC JASPAR yes 70730744
chr5 145236457 145236461 YY1 TRANSFAC yes 66626989
chr5 145236457 145236461 YY1 TRANSFAC yes 70730745
chr5 145236460 145236475 MEF2A JASPAR yes 66626990
chr5 145236460 145236475 MEF2A JASPAR yes 70730746
chr5 145236461 145236476 MEF2C JASPAR yes 66626991
chr5 145236461 145236476 MEF2C JASPAR yes 70730747
chr5 145236461 145236482 IRF1 JASPAR yes 66626992
chr5 145236461 145236482 IRF1 JASPAR yes 70730748
chr5 145236462 145236474 MEF2A JASPAR yes 66626993
chr5 145236462 145236474 MEF2A JASPAR yes 70730749
chr5 145236463 145236473 MEF2A JASPAR yes 66626994
chr5 145236463 145236473 MEF2A JASPAR yes 70730750
chr5 145236464 145236468 YY1 TRANSFAC yes 66626995
chr5 145236464 145236468 YY1 TRANSFAC yes 70730751
chr5 145236465 145236477 IRF1 JASPAR yes 66626996
chr5 145236465 145236477 IRF1 JASPAR yes 70730752
chr5 145236466 145236481 MEF2A JASPAR yes 66626997
chr5 145236466 145236481 MEF2A JASPAR yes 70730753
chr5 145236467 145236482 MEF2C JASPAR yes 66626998
chr5 145236467 145236482 MEF2C JASPAR yes 70730754
chr5 145236468 145236480 MEF2A JASPAR yes 66626999
chr5 145236468 145236480 MEF2B JASPAR yes 66627000
chr5 145236468 145236480 MEF2D JASPAR yes 66627001
chr5 145236468 145236480 MEF2A JASPAR yes 70730755
chr5 145236468 145236480 MEF2B JASPAR yes 70730756
chr5 145236468 145236480 MEF2D JASPAR yes 70730757
chr5 145236468 145236484 POU4F3 JASPAR yes 66627002
chr5 145236468 145236484 POU4F3 JASPAR yes 70730758
chr5 145236469 145236479 MEF2A JASPAR yes 66627003
chr5 145236469 145236479 MEF2A JASPAR yes 70730759
chr5 145236470 145236474 YY1 TRANSFAC yes 66627004
chr5 145236470 145236474 YY1 TRANSFAC yes 70730760
chr5 145236470 145236484 POU4F1 JASPAR yes 66627005
chr5 145236470 145236484 POU4F1 JASPAR yes 70730761
chr5 145236513 145236527 TLX1 JASPAR yes 66627006
chr5 145236513 145236527 TLX1 JASPAR yes 70730762
chr5 145236514 145236528 TLX1 JASPAR yes 66627007
chr5 145236514 145236528 TLX1 JASPAR yes 70730763
chr5 145236541 145236556 MEF2A JASPAR yes 66627008
chr5 145236541 145236556 MEF2A JASPAR yes 70730764
chr5 145236544 145236558 POU1F1 JASPAR yes 66627009
chr5 145236544 145236558 POU1F1 JASPAR yes 70730765
chr5 145236551 145236566 STAT2 JASPAR yes 66627010
chr5 145236551 145236566 STAT2 JASPAR yes 70730766
SNP sites on vista49477[chr5:145236184-145236553]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 145236332 rs11954093 T C no 8590401
chr5 145236405 rs114624454 C T no 8590402
chr5 145236496 rs6866022 T A no 8590403
Genes possibly regulated by vista49477[chr5:145236184-145236553]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 144851362 145214932 - PRELID2 ENSG00000186314.7 145214932 0.88 0.99 5834 78748
chr5 145239296 145252531 - GRXCR2 ENSG00000204928.1 145252531 0.98 0.0 5835 84022
chr5 145316142 145461354 + SH3RF2 ENSG00000156463.13 145316142 0.86 1.0 5836 20411
Expression level of Genes
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miRNAs possibly regulated by vista49477[chr5:145236184-145236553]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results