EnhancerDB
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  3. vista49479[chr5:145326011-145326414]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49479[chr5:145326011-145326414]
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Tissue distribution of vista49479
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Transcription factor that possibly regulate vista49479[chr5:145326011-145326414]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 145326045 145326595 TCF7L2 UCSC Txn Factor no Conserved 108536844
chr5 145326117 145326441 CEBPB UCSC Txn Factor no Conserved 108536845
chr5 145326147 145326419 RUNX3 UCSC Txn Factor no Conserved 108536846
chr5 145326151 145326409 BATF UCSC Txn Factor no Conserved 108536847
chr5 145326002 145326015 JUN JASPAR yes 66631473
chr5 145326002 145326015 JUN JASPAR yes 70730768
chr5 145326004 145326012 RHOXF1 JASPAR yes 66631474
chr5 145326004 145326012 RHOXF1 JASPAR yes 70730769
chr5 145326016 145326019 MYB TRANSFAC yes 66631475
chr5 145326016 145326019 MYB TRANSFAC yes 70730770
chr5 145326020 145326030 POU6F2 JASPAR yes 66631476
chr5 145326020 145326030 POU6F2 JASPAR yes 70730771
chr5 145326024 145326028 YY1 TRANSFAC yes 66631477
chr5 145326024 145326028 YY1 TRANSFAC yes 70730772
chr5 145326032 145326038 HiNF-A TRANSFAC yes 66631478
chr5 145326032 145326038 HiNF-A TRANSFAC yes 70730773
chr5 145326058 145326062 YY1 TRANSFAC yes 66631479
chr5 145326058 145326062 YY1 TRANSFAC yes 70730774
chr5 145326069 145326073 YY1 TRANSFAC yes 66631480
chr5 145326069 145326073 YY1 TRANSFAC yes 70730775
chr5 145326074 145326087 SCRT2 JASPAR yes 66631481
chr5 145326074 145326087 SCRT2 JASPAR yes 70730776
chr5 145326074 145326089 SCRT1 JASPAR yes 66631482
chr5 145326074 145326089 SCRT1 JASPAR yes 70730777
chr5 145326106 145326117 USF1 JASPAR yes 66631483
chr5 145326106 145326117 USF1 JASPAR yes 70730778
chr5 145326107 145326117 TFE3 JASPAR yes 66631484
chr5 145326107 145326117 TFEB JASPAR yes 66631485
chr5 145326107 145326117 TFEC JASPAR yes 66631486
chr5 145326107 145326117 TFE3 JASPAR yes 70730779
chr5 145326107 145326117 TFEB JASPAR yes 70730780
chr5 145326107 145326117 TFEC JASPAR yes 70730781
chr5 145326123 145326135 TEAD1 JASPAR yes 66631487
chr5 145326123 145326135 TEAD1 JASPAR yes 70730782
chr5 145326127 145326144 BCL6B JASPAR yes 66631488
chr5 145326127 145326144 BCL6B JASPAR yes 70730783
chr5 145326134 145326145 FOS JASPAR yes 66631489
chr5 145326134 145326145 JUND JASPAR yes 66631490
chr5 145326134 145326145 FOS JASPAR yes 70730784
chr5 145326134 145326145 JUND JASPAR yes 70730785
chr5 145326135 145326146 FOSL2 JASPAR yes 66631491
chr5 145326135 145326146 JUNB JASPAR yes 66631492
chr5 145326135 145326146 FOSL2 JASPAR yes 70730786
chr5 145326135 145326146 JUNB JASPAR yes 70730787
chr5 145326135 145326149 JUN JASPAR yes 66631493
chr5 145326135 145326149 JUN JASPAR yes 70730788
chr5 145326136 145326142 JUN TRANSFAC yes 66631494
chr5 145326136 145326142 JUN TRANSFAC yes 70730789
chr5 145326152 145326170 SRF JASPAR yes 66631495
chr5 145326152 145326170 SRF JASPAR yes 70730790
chr5 145326210 145326216 MYC TRANSFAC yes 66631496
chr5 145326210 145326216 MYC TRANSFAC yes 70730791
chr5 145326230 145326233 MYB TRANSFAC yes 66631497
chr5 145326230 145326233 MYB TRANSFAC yes 70730792
chr5 145326241 145326247 GATA3 JASPAR yes 66631498
chr5 145326241 145326247 GATA3 JASPAR yes 70730793
chr5 145326261 145326272 BATF JASPAR yes 66631499
chr5 145326261 145326272 BATF JASPAR yes 70730794
chr5 145326273 145326284 NFIL3 JASPAR yes 66631500
chr5 145326273 145326284 NFIL3 JASPAR yes 70730795
chr5 145326274 145326286 DBP JASPAR yes 66631501
chr5 145326274 145326286 HLF JASPAR yes 66631502
chr5 145326274 145326286 DBP JASPAR yes 70730796
chr5 145326274 145326286 HLF JASPAR yes 70730797
chr5 145326274 145326287 ATF4 JASPAR yes 66631503
chr5 145326274 145326287 ATF4 JASPAR yes 70730798
chr5 145326274 145326289 JUND JASPAR yes 66631504
chr5 145326274 145326289 JUND JASPAR yes 70730799
chr5 145326275 145326288 JUN JASPAR yes 66631505
chr5 145326275 145326288 JUN JASPAR yes 70730800
chr5 145326284 145326299 RUNX2 JASPAR yes 66631506
chr5 145326284 145326299 RUNX2 JASPAR yes 70730801
chr5 145326285 145326295 RUNX3 JASPAR yes 66631507
chr5 145326285 145326295 RUNX3 JASPAR yes 70730802
chr5 145326289 145326297 HOXA5 JASPAR yes 66631508
chr5 145326289 145326297 HOXA5 JASPAR yes 70730803
chr5 145326301 145326316 HNF4A JASPAR yes 66631509
chr5 145326301 145326316 HNF4A JASPAR yes 70730804
chr5 145326302 145326317 HNF4G JASPAR yes 66631510
chr5 145326302 145326317 LEF1 JASPAR yes 66631511
chr5 145326302 145326317 NR2C2 JASPAR yes 66631512
chr5 145326302 145326317 HNF4G JASPAR yes 70730805
chr5 145326302 145326317 LEF1 JASPAR yes 70730806
chr5 145326302 145326317 NR2C2 JASPAR yes 70730807
chr5 145326303 145326317 TCF7L2 JASPAR yes 66631513
chr5 145326303 145326317 TCF7L2 JASPAR yes 70730808
chr5 145326306 145326312 LEF1 TRANSFAC yes 66631514
chr5 145326306 145326312 TCF4 TRANSFAC yes 66631515
chr5 145326306 145326312 LEF1 TRANSFAC yes 70730809
chr5 145326306 145326312 TCF4 TRANSFAC yes 70730810
chr5 145326307 145326318 ESRRB JASPAR yes 66631516
chr5 145326307 145326318 ESRRB JASPAR yes 70730811
chr5 145326334 145326337 MYB TRANSFAC yes 66631517
chr5 145326334 145326337 MYB TRANSFAC yes 70730812
chr5 145326354 145326359 GATA2 JASPAR yes 66631518
chr5 145326354 145326359 GATA2 JASPAR yes 70730813
chr5 145326369 145326379 GABPA JASPAR yes 66631519
chr5 145326369 145326379 GABPA JASPAR yes 70730814
chr5 145326370 145326375 ETS2 TRANSFAC yes 66631520
chr5 145326370 145326375 ETS2 TRANSFAC yes 70730815
chr5 145326401 145326412 HOXC13 JASPAR yes 66631521
chr5 145326401 145326412 HOXC13 JASPAR yes 70730816
chr5 145326408 145326423 ESR2 JASPAR yes 66631522
chr5 145326408 145326423 ESR2 JASPAR yes 70730817
SNP sites on vista49479[chr5:145326011-145326414]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 145326389 rs138989454 G C
BATF CEBPB RUNX3 TCF7L2
8590896
chr5 145326395 rs12654235 G T
BATF CEBPB RUNX3 TCF7L2
8590897
chr5 145326396 rs12658489 C A
BATF CEBPB RUNX3 TCF7L2
8590898
Genes possibly regulated by vista49479[chr5:145326011-145326414]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 145239296 145252531 - GRXCR2 ENSG00000204928.1 145252531 0.98 0.0 5835 26520
chr5 145316142 145461354 + SH3RF2 ENSG00000156463.13 145316142 0.86 1.0 5836 90131
Expression level of Genes
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miRNAs possibly regulated by vista49479[chr5:145326011-145326414]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results