EnhancerDB
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  3. vista49480[chr5:145356389-145356594]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49480[chr5:145356389-145356594]
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Tissue distribution of vista49480
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Transcription factor that possibly regulate vista49480[chr5:145356389-145356594]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 145356384 145356395 TBX2 JASPAR yes 66634557
chr5 145356384 145356395 TBX2 JASPAR yes 70730818
chr5 145356395 145356405 RORA JASPAR yes 66634558
chr5 145356395 145356405 RORA JASPAR yes 70730819
chr5 145356396 145356409 NR2F1 JASPAR yes 66634559
chr5 145356396 145356409 NR2F1 JASPAR yes 70730820
chr5 145356398 145356406 NR4A2 JASPAR yes 66634560
chr5 145356398 145356406 NR4A2 JASPAR yes 70730821
chr5 145356400 145356404 ESR1 TRANSFAC yes 66634561
chr5 145356400 145356404 ESR1 TRANSFAC yes 70730822
chr5 145356400 145356414 ZIC1 JASPAR yes 66634562
chr5 145356400 145356414 ZIC1 JASPAR yes 70730823
chr5 145356400 145356415 ZIC3 JASPAR yes 66634563
chr5 145356400 145356415 ZIC4 JASPAR yes 66634564
chr5 145356400 145356415 ZIC3 JASPAR yes 70730824
chr5 145356400 145356415 ZIC4 JASPAR yes 70730825
chr5 145356412 145356421 THAP1 JASPAR yes 66634565
chr5 145356412 145356421 THAP1 JASPAR yes 70730826
chr5 145356415 145356419 LFA1 TRANSFAC yes 66634566
chr5 145356415 145356419 LFA1 TRANSFAC yes 70730827
chr5 145356446 145356450 TEAD2 TRANSFAC yes 66634567
chr5 145356446 145356450 TEAD2 TRANSFAC yes 70730828
chr5 145356461 145356475 SPI1 JASPAR yes 66634568
chr5 145356461 145356475 SPIC JASPAR yes 66634569
chr5 145356461 145356475 SPI1 JASPAR yes 70730829
chr5 145356461 145356475 SPIC JASPAR yes 70730830
chr5 145356462 145356475 ELF1 JASPAR yes 66634570
chr5 145356462 145356475 ELF1 JASPAR yes 70730831
chr5 145356464 145356475 ELF5 JASPAR yes 66634571
chr5 145356464 145356475 ELF5 JASPAR yes 70730832
chr5 145356465 145356472 SPIB JASPAR yes 66634572
chr5 145356465 145356472 SPIB JASPAR yes 70730833
chr5 145356466 145356474 EHF JASPAR yes 66634573
chr5 145356466 145356474 EHF JASPAR yes 70730834
chr5 145356467 145356474 SPI1 JASPAR yes 66634574
chr5 145356467 145356474 SPI1 JASPAR yes 70730835
chr5 145356483 145356494 FOS JASPAR yes 66634575
chr5 145356483 145356494 FOS JASPAR yes 70730836
chr5 145356485 145356496 BATF JASPAR yes 66634576
chr5 145356485 145356496 BATF JASPAR yes 70730837
chr5 145356487 145356498 HOXC13 JASPAR yes 66634577
chr5 145356487 145356498 HOXC13 JASPAR yes 70730838
chr5 145356497 145356509 INSM1 JASPAR yes 66634578
chr5 145356497 145356509 INSM1 JASPAR yes 70730839
chr5 145356510 145356523 SMAD2 JASPAR yes 66634579
chr5 145356510 145356523 SMAD2 JASPAR yes 70730840
chr5 145356522 145356540 SRF JASPAR yes 66634580
chr5 145356522 145356540 SRF JASPAR yes 70730841
chr5 145356528 145356532 YY1 TRANSFAC yes 66634581
chr5 145356528 145356532 YY1 TRANSFAC yes 70730842
chr5 145356532 145356542 SMAD3 JASPAR yes 66634582
chr5 145356532 145356542 SMAD3 JASPAR yes 70730843
chr5 145356581 145356591 TFEC JASPAR yes 66634583
chr5 145356581 145356591 TFEC JASPAR yes 70730844
chr5 145356591 145356606 TP53 JASPAR yes 66634584
chr5 145356591 145356606 TP53 JASPAR yes 70730845
SNP sites on vista49480[chr5:145356389-145356594]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 145356431 rs148118541 T C no 8591118
chr5 145356447 rs181368554 T C
TEAD2
8591119
chr5 145356498 rs143933081 T G
HOXC13 INSM1
8591120
chr5 145356504 rs546635335 C T
INSM1
8591121
chr5 145356526 rs147240248 C A
SRF
8591122
Genes possibly regulated by vista49480[chr5:145356389-145356594]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 145316142 145461354 + SH3RF2 ENSG00000156463.13 145316142 0.86 1.0 5836 59753
Expression level of Genes
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miRNAs possibly regulated by vista49480[chr5:145356389-145356594]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results