EnhancerDB
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  3. vista49486[chr5:145572478-145572767]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49486[chr5:145572478-145572767]
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Tissue distribution of vista49486
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Transcription factor that possibly regulate vista49486[chr5:145572478-145572767]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 145572257 145572538 CEBPB UCSC Txn Factor no Conserved 108536848
chr5 145572475 145572490 FOXP1 JASPAR yes 66645739
chr5 145572475 145572490 FOXP1 JASPAR yes 70731208
chr5 145572478 145572493 STAT2 JASPAR yes 66645740
chr5 145572478 145572493 STAT2 JASPAR yes 70731209
chr5 145572498 145572504 SOX10 JASPAR yes 66645741
chr5 145572498 145572504 SOX10 JASPAR yes 70731210
chr5 145572505 145572519 POU1F1 JASPAR yes 66645742
chr5 145572505 145572519 POU1F1 JASPAR yes 70731211
chr5 145572506 145572518 POU3F1 JASPAR yes 66645743
chr5 145572506 145572518 POU3F1 JASPAR yes 70731212
chr5 145572506 145572519 POU2F2 JASPAR yes 66645744
chr5 145572506 145572519 POU2F2 JASPAR yes 70731213
chr5 145572507 145572515 FOXL1 JASPAR yes 66645745
chr5 145572507 145572515 FOXL1 JASPAR yes 70731214
chr5 145572507 145572516 POU5F1B JASPAR yes 66645746
chr5 145572507 145572516 POU5F1B JASPAR yes 70731215
chr5 145572518 145572529 STAT3 JASPAR yes 66645747
chr5 145572518 145572529 STAT3 JASPAR yes 70731216
chr5 145572542 145572548 TCF4 TRANSFAC yes 66645748
chr5 145572542 145572548 TCF4 TRANSFAC yes 70731217
chr5 145572572 145572592 RREB1 JASPAR yes 66645749
chr5 145572572 145572592 RREB1 JASPAR yes 70731218
chr5 145572574 145572589 FOXA1 JASPAR yes 66645750
chr5 145572574 145572589 FOXA1 JASPAR yes 70731219
chr5 145572575 145572581 TCF4 TRANSFAC yes 66645751
chr5 145572575 145572581 TCF4 TRANSFAC yes 70731220
chr5 145572575 145572587 FOXI1 JASPAR yes 66645752
chr5 145572575 145572587 FOXI1 JASPAR yes 70731221
chr5 145572575 145572590 FOXP1 JASPAR yes 66645753
chr5 145572575 145572590 FOXP1 JASPAR yes 70731222
chr5 145572576 145572588 FOXC2 JASPAR yes 66645754
chr5 145572576 145572588 FOXC2 JASPAR yes 70731223
chr5 145572578 145572589 FOXA1 JASPAR yes 66645755
chr5 145572578 145572589 FOXA1 JASPAR yes 70731224
chr5 145572578 145572598 RREB1 JASPAR yes 66645756
chr5 145572578 145572598 RREB1 JASPAR yes 70731225
chr5 145572578 145572599 IRF1 JASPAR yes 66645757
chr5 145572578 145572599 IRF1 JASPAR yes 70731226
chr5 145572579 145572594 FOXP1 JASPAR yes 66645758
chr5 145572579 145572594 FOXP1 JASPAR yes 70731227
chr5 145572580 145572595 STAT2 JASPAR yes 66645759
chr5 145572580 145572595 STAT2 JASPAR yes 70731228
chr5 145572583 145572595 IRF1 JASPAR yes 66645760
chr5 145572583 145572595 IRF1 JASPAR yes 70731229
chr5 145572585 145572591 TCF4 TRANSFAC yes 66645761
chr5 145572585 145572591 TCF4 TRANSFAC yes 70731230
chr5 145572585 145572600 FOXP1 JASPAR yes 66645762
chr5 145572585 145572600 FOXP1 JASPAR yes 70731231
chr5 145572586 145572597 FOXP2 JASPAR yes 66645763
chr5 145572586 145572597 FOXP2 JASPAR yes 70731232
chr5 145572605 145572624 PAX5 JASPAR yes 66645764
chr5 145572605 145572624 PAX5 JASPAR yes 70731233
chr5 145572642 145572659 PAX1 JASPAR yes 66645765
chr5 145572642 145572659 PAX9 JASPAR yes 66645766
chr5 145572642 145572659 PAX1 JASPAR yes 70731234
chr5 145572642 145572659 PAX9 JASPAR yes 70731235
chr5 145572643 145572662 PAX5 JASPAR yes 66645767
chr5 145572643 145572662 PAX5 JASPAR yes 70731236
chr5 145572663 145572676 ELF3 JASPAR yes 66645768
chr5 145572663 145572676 ELF3 JASPAR yes 70731237
chr5 145572664 145572669 H4TF1 TRANSFAC yes 66645769
chr5 145572664 145572669 H4TF1 TRANSFAC yes 70731238
chr5 145572664 145572675 ELF5 JASPAR yes 66645770
chr5 145572664 145572675 ELF5 JASPAR yes 70731239
chr5 145572664 145572676 EHF JASPAR yes 66645771
chr5 145572664 145572676 ELF1 JASPAR yes 66645772
chr5 145572664 145572676 EHF JASPAR yes 70731240
chr5 145572664 145572676 ELF1 JASPAR yes 70731241
chr5 145572664 145572677 ELF1 JASPAR yes 66645773
chr5 145572664 145572677 ELF1 JASPAR yes 70731242
chr5 145572665 145572673 FEV JASPAR yes 66645774
chr5 145572665 145572673 FEV JASPAR yes 70731243
chr5 145572687 145572700 ATF4 JASPAR yes 70731244
chr5 145572727 145572739 FOXI1 JASPAR yes 70731245
chr5 145572731 145572749 RARA JASPAR yes 70731246
chr5 145572741 145572762 ZNF263 JASPAR yes 70731247
SNP sites on vista49486[chr5:145572478-145572767]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 145572642 rs111227457 T C
PAX1 PAX9
8592220
chr5 145572655 rs79329903 C A
PAX1 PAX5 PAX9
8592221
chr5 145572658 rs13175587 C T
PAX1 PAX5 PAX9
8592222
chr5 145572664 rs13161488 T C
EHF ELF1 ELF3 ELF5 H4TF1
8592223
chr5 145572704 rs112561145 T C no 8592224
Genes possibly regulated by vista49486[chr5:145572478-145572767]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 145463949 145483932 - PLAC8L1 ENSG00000173261.4 145483932 0.73 1.0 5837 11454
chr5 145492601 145562223 - LARS ENSG00000133706.13 145562223 0.66 0.99 5838 89745
chr5 145583113 145718814 + RBM27 ENSG00000091009.6 145583113 0.6 0.99 5839 89654
Expression level of Genes
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miRNAs possibly regulated by vista49486[chr5:145572478-145572767]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results