EnhancerDB
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  3. vista49494[chr5:146200379-146200464]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49494[chr5:146200379-146200464]
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Tissue distribution of vista49494
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Transcription factor that possibly regulate vista49494[chr5:146200379-146200464]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 146200377 146200386 NFIX JASPAR yes 66670093
chr5 146200377 146200386 NFIX JASPAR yes 70731482
chr5 146200379 146200385 NFIC JASPAR yes 66670094
chr5 146200379 146200385 NFIC JASPAR yes 70731483
chr5 146200415 146200427 NHLH1 JASPAR yes 66670095
chr5 146200415 146200427 NHLH1 JASPAR yes 70731484
chr5 146200428 146200439 ESRRB JASPAR yes 66670096
chr5 146200428 146200439 ESRRB JASPAR yes 70731485
chr5 146200429 146200443 RORA JASPAR yes 66670097
chr5 146200429 146200443 RORA JASPAR yes 70731486
chr5 146200430 146200440 RORA JASPAR yes 66670098
chr5 146200430 146200440 RORA JASPAR yes 70731487
chr5 146200436 146200442 GATA3 JASPAR yes 66670099
chr5 146200436 146200442 GATA3 JASPAR yes 70731488
chr5 146200456 146200460 NFE TRANSFAC yes 66670100
chr5 146200456 146200460 NFE TRANSFAC yes 70731489
chr5 146200456 146200461 GATA1 TRANSFAC yes 66670101
chr5 146200456 146200461 GATA1 TRANSFAC yes 70731490
chr5 146200456 146200462 GATA3 JASPAR yes 66670102
chr5 146200456 146200462 GATA3 JASPAR yes 70731491
chr5 146200458 146200473 MEF2A JASPAR yes 66670103
chr5 146200458 146200473 MEF2A JASPAR yes 70731492
SNP sites on vista49494[chr5:146200379-146200464]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 146200422 rs543262669 C T
NHLH1
8594456
Genes possibly regulated by vista49494[chr5:146200379-146200464]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista49494[chr5:146200379-146200464]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results