EnhancerDB
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  3. vista49520[chr5:147072911-147073086]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49520[chr5:147072911-147073086]
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Tissue distribution of vista49520
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Transcription factor that possibly regulate vista49520[chr5:147072911-147073086]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147072934 147072938 YY1 TRANSFAC yes 66706187
chr5 147072934 147072938 YY1 TRANSFAC yes 70732481
chr5 147072943 147072947 YY1 TRANSFAC yes 66706188
chr5 147072943 147072947 YY1 TRANSFAC yes 70732482
chr5 147072956 147072968 PKNOX1 JASPAR yes 66706189
chr5 147072956 147072968 PKNOX2 JASPAR yes 66706190
chr5 147072956 147072968 TGIF1 JASPAR yes 66706191
chr5 147072956 147072968 TGIF2 JASPAR yes 66706192
chr5 147072956 147072968 PKNOX1 JASPAR yes 70732483
chr5 147072956 147072968 PKNOX2 JASPAR yes 70732484
chr5 147072956 147072968 TGIF1 JASPAR yes 70732485
chr5 147072956 147072968 TGIF2 JASPAR yes 70732486
chr5 147072957 147072968 USF1 JASPAR yes 66706193
chr5 147072957 147072968 USF2 JASPAR yes 66706194
chr5 147072957 147072968 USF1 JASPAR yes 70732487
chr5 147072957 147072968 USF2 JASPAR yes 70732488
chr5 147072966 147072970 YY1 TRANSFAC yes 66706195
chr5 147072966 147072970 YY1 TRANSFAC yes 70732489
chr5 147072968 147072983 JUND JASPAR yes 66706196
chr5 147072968 147072983 JUND JASPAR yes 70732490
chr5 147072969 147072982 DUXA JASPAR yes 66706197
chr5 147072969 147072982 DUXA JASPAR yes 70732491
chr5 147072970 147072981 DUX4 JASPAR yes 66706198
chr5 147072970 147072981 DUX4 JASPAR yes 70732492
chr5 147072971 147072986 JUND JASPAR yes 66706199
chr5 147072971 147072986 JUND JASPAR yes 70732493
chr5 147072972 147072985 JUN JASPAR yes 66706200
chr5 147072972 147072985 JUN JASPAR yes 70732494
chr5 147072982 147072990 FOXC1 JASPAR yes 66706201
chr5 147072982 147072990 FOXC1 JASPAR yes 70732495
chr5 147072999 147073012 EOMES JASPAR yes 66706202
chr5 147072999 147073012 EOMES JASPAR yes 70732496
chr5 147073001 147073011 TBR1 JASPAR yes 66706203
chr5 147073001 147073011 TBR1 JASPAR yes 70732497
chr5 147073001 147073012 TBX20 JASPAR yes 66706204
chr5 147073001 147073012 TBX2 JASPAR yes 66706205
chr5 147073001 147073012 TBX20 JASPAR yes 70732498
chr5 147073001 147073012 TBX2 JASPAR yes 70732499
chr5 147073002 147073012 TBX21 JASPAR yes 66706206
chr5 147073002 147073012 TBX21 JASPAR yes 70732500
chr5 147073004 147073018 RORA JASPAR yes 66706207
chr5 147073004 147073018 RORA JASPAR yes 70732501
chr5 147073010 147073021 NFIL3 JASPAR yes 66706208
chr5 147073010 147073021 NFIL3 JASPAR yes 70732502
chr5 147073035 147073053 IRF2 JASPAR yes 66706209
chr5 147073035 147073053 IRF2 JASPAR yes 70732503
chr5 147073036 147073057 IRF1 JASPAR yes 66706210
chr5 147073036 147073057 IRF1 JASPAR yes 70732504
chr5 147073038 147073053 PRDM1 JASPAR yes 66706211
chr5 147073038 147073053 STAT2 JASPAR yes 66706212
chr5 147073038 147073053 PRDM1 JASPAR yes 70732505
chr5 147073038 147073053 STAT2 JASPAR yes 70732506
chr5 147073039 147073053 SPIC JASPAR yes 66706213
chr5 147073039 147073053 STAT1 JASPAR yes 66706214
chr5 147073039 147073053 SPIC JASPAR yes 70732507
chr5 147073039 147073053 STAT1 JASPAR yes 70732508
chr5 147073044 147073059 LEF1 JASPAR yes 66706215
chr5 147073044 147073059 LEF1 JASPAR yes 70732509
chr5 147073045 147073059 TCF7L2 JASPAR yes 66706216
chr5 147073045 147073059 TCF7L2 JASPAR yes 70732510
SNP sites on vista49520[chr5:147072911-147073086]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147072919 rs180671816 A C no 8597830
chr5 147073070 rs56920672 C A no 8597831
Genes possibly regulated by vista49520[chr5:147072911-147073086]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 146967990 147162338 - JAKMIP2 ENSG00000176049.11 147162338 0.93 0.96 5846 10748
Expression level of Genes
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miRNAs possibly regulated by vista49520[chr5:147072911-147073086]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results