EnhancerDB
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  3. vista49527[chr5:147160341-147160727]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49527[chr5:147160341-147160727]
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Tissue distribution of vista49527
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Transcription factor that possibly regulate vista49527[chr5:147160341-147160727]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147160379 147160388 SOX9 JASPAR yes 70732710
chr5 147160380 147160390 MYF6 JASPAR yes 70732711
chr5 147160384 147160393 SRY JASPAR yes 70732712
chr5 147160389 147160393 YY1 TRANSFAC yes 70732713
chr5 147160397 147160407 HOXD11 JASPAR yes 70732714
chr5 147160401 147160407 TBP TRANSFAC yes 70732715
chr5 147160417 147160433 SOX4 JASPAR yes 70732716
chr5 147160418 147160433 SOX21 JASPAR yes 70732717
chr5 147160418 147160434 SOX4 JASPAR yes 70732718
chr5 147160448 147160453 GATA2 JASPAR yes 70732719
chr5 147160457 147160461 TEAD2 TRANSFAC yes 70732720
chr5 147160466 147160476 MAX JASPAR yes 70732721
chr5 147160497 147160511 RORA JASPAR yes 70732722
chr5 147160499 147160517 NR3C1 JASPAR yes 70732723
chr5 147160523 147160534 PROP1 JASPAR yes 70732724
chr5 147160533 147160543 PAX3 JASPAR yes 70732725
chr5 147160533 147160543 PAX7 JASPAR yes 70732726
chr5 147160538 147160542 YY1 TRANSFAC yes 70732727
chr5 147160541 147160546 GATA2 JASPAR yes 70732728
chr5 147160545 147160557 E2F8 JASPAR yes 70732729
chr5 147160547 147160552 SP1 TRANSFAC yes 70732730
chr5 147160547 147160558 E2F4 JASPAR yes 70732731
chr5 147160547 147160558 E2F6 JASPAR yes 70732732
chr5 147160548 147160553 SP1 TRANSFAC yes 70732733
chr5 147160612 147160621 CDX1 JASPAR yes 70732734
chr5 147160616 147160626 RORA JASPAR yes 70732735
chr5 147160617 147160630 NR2F1 JASPAR yes 70732736
chr5 147160618 147160636 ESR1 JASPAR yes 70732737
chr5 147160618 147160636 ESR2 JASPAR yes 70732738
chr5 147160619 147160627 NR4A2 JASPAR yes 70732739
chr5 147160620 147160635 ESR2 JASPAR yes 70732740
chr5 147160620 147160637 RARA JASPAR yes 70732741
chr5 147160620 147160637 RXRA JASPAR yes 70732742
chr5 147160621 147160625 ESR1 TRANSFAC yes 70732743
chr5 147160642 147160646 YY1 TRANSFAC yes 70732744
chr5 147160660 147160671 YY2 JASPAR yes 70732745
chr5 147160666 147160670 YY1 TRANSFAC yes 70732746
chr5 147160688 147160709 ZNF263 JASPAR yes 70732747
chr5 147160700 147160706 TCF4 TRANSFAC yes 70732748
chr5 147160720 147160724 YY1 TRANSFAC yes 70732749
SNP sites on vista49527[chr5:147160341-147160727]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147160359 rs148424645 C G no 8598448
chr5 147160361 rs189836489 G C no 8598449
chr5 147160394 rs568885584 T A no 8598450
chr5 147160417 rs180895272 C G
SOX4
8598451
chr5 147160431 rs12655202 G A
SOX21 SOX4
8598452
chr5 147160500 rs142584266 T A
NR3C1 RORA
8598453
chr5 147160664 rs150509299 C A
YY2
8598454
chr5 147160678 rs72835179 C T no 8598455
Genes possibly regulated by vista49527[chr5:147160341-147160727]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 146967990 147162338 - JAKMIP2 ENSG00000176049.11 147162338 0.93 0.96 5846 98389
chr5 147204131 147211349 - SPINK1 ENSG00000164266.6 147211349 1.0 0.96 5847 49378
chr5 147250245 147261754 + SCGB3A2 ENSG00000164265.4 147250245 1.0 1.0 5848 10482
Expression level of Genes
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miRNAs possibly regulated by vista49527[chr5:147160341-147160727]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results