EnhancerDB
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  3. vista49535[chr5:147197647-147198100]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49535[chr5:147197647-147198100]
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Tissue distribution of vista49535
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Transcription factor that possibly regulate vista49535[chr5:147197647-147198100]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147197657 147197661 H1TF2 TRANSFAC yes 66716565
chr5 147197657 147197661 NFE TRANSFAC yes 66716566
chr5 147197657 147197661 SRF TRANSFAC yes 66716567
chr5 147197657 147197661 H1TF2 TRANSFAC yes 70733280
chr5 147197657 147197661 NFE TRANSFAC yes 70733281
chr5 147197657 147197661 SRF TRANSFAC yes 70733282
chr5 147197672 147197677 GATA2 JASPAR yes 66716568
chr5 147197672 147197677 GATA2 JASPAR yes 70733283
chr5 147197674 147197681 NKX3-1 JASPAR yes 66716569
chr5 147197674 147197681 NKX3-1 JASPAR yes 70733284
chr5 147197679 147197685 TBP TRANSFAC yes 66716570
chr5 147197679 147197685 TBP TRANSFAC yes 70733285
chr5 147197715 147197720 TFAP2A TRANSFAC yes 66716571
chr5 147197715 147197720 TFAP2A TRANSFAC yes 70733286
chr5 147197715 147197721 MZF1 JASPAR yes 66716572
chr5 147197715 147197721 MZF1 JASPAR yes 70733287
chr5 147197758 147197762 YY1 TRANSFAC yes 66716573
chr5 147197758 147197762 YY1 TRANSFAC yes 70733288
chr5 147197767 147197777 NFIA JASPAR yes 66716574
chr5 147197767 147197777 NFIA JASPAR yes 70733289
chr5 147197769 147197775 NFIC JASPAR yes 66716575
chr5 147197769 147197775 NFIC JASPAR yes 70733290
chr5 147197774 147197780 HiNF-A TRANSFAC yes 66716576
chr5 147197774 147197780 HiNF-A TRANSFAC yes 70733291
chr5 147197787 147197808 IRF1 JASPAR yes 66716577
chr5 147197787 147197808 IRF1 JASPAR yes 70733292
chr5 147197791 147197805 SPI1 JASPAR yes 66716578
chr5 147197791 147197805 SPI1 JASPAR yes 70733293
chr5 147197802 147197812 NKX2-3 JASPAR yes 66716579
chr5 147197802 147197812 NKX2-3 JASPAR yes 70733294
chr5 147197803 147197812 NKX2-8 JASPAR yes 66716580
chr5 147197803 147197812 NKX2-8 JASPAR yes 70733295
chr5 147197808 147197819 BATF JASPAR yes 66716581
chr5 147197808 147197819 BATF JASPAR yes 70733296
chr5 147197835 147197839 H4TF2 TRANSFAC yes 66716582
chr5 147197835 147197839 H4TF2 TRANSFAC yes 70733297
chr5 147197907 147197912 TFAP2A TRANSFAC yes 66716583
chr5 147197907 147197912 TFAP2A TRANSFAC yes 70733298
chr5 147197907 147197913 MZF1 JASPAR yes 66716584
chr5 147197907 147197913 MZF1 JASPAR yes 70733299
chr5 147197915 147197925 MAX JASPAR yes 66716585
chr5 147197915 147197925 MAX JASPAR yes 70733300
chr5 147197928 147197948 RREB1 JASPAR yes 66716586
chr5 147197928 147197948 RREB1 JASPAR yes 70733301
chr5 147197930 147197945 FOXA1 JASPAR yes 66716587
chr5 147197930 147197945 FOXA1 JASPAR yes 70733302
chr5 147197931 147197943 FOXI1 JASPAR yes 66716588
chr5 147197931 147197943 FOXI1 JASPAR yes 70733303
chr5 147197934 147197945 FOXA1 JASPAR yes 66716589
chr5 147197934 147197945 FOXA1 JASPAR yes 70733304
chr5 147197943 147197964 IRF1 JASPAR yes 66716590
chr5 147197943 147197964 IRF1 JASPAR yes 70733305
chr5 147197945 147197955 ETV6 JASPAR yes 66716591
chr5 147197945 147197955 ETV6 JASPAR yes 70733306
chr5 147197946 147197954 EHF JASPAR yes 66716592
chr5 147197946 147197954 EHF JASPAR yes 70733307
chr5 147197947 147197954 SPI1 JASPAR yes 66716593
chr5 147197947 147197954 SPI1 JASPAR yes 70733308
chr5 147197947 147197962 STAT2 JASPAR yes 66716594
chr5 147197947 147197962 STAT2 JASPAR yes 70733309
chr5 147197949 147197970 IRF1 JASPAR yes 66716595
chr5 147197949 147197970 IRF1 JASPAR yes 70733310
chr5 147197961 147197975 JUN JASPAR yes 66716596
chr5 147197961 147197975 JUN JASPAR yes 70733311
chr5 147197964 147197977 ATF4 JASPAR yes 66716597
chr5 147197964 147197977 ATF4 JASPAR yes 70733312
chr5 147197966 147197979 DUXA JASPAR yes 66716598
chr5 147197966 147197979 DUXA JASPAR yes 70733313
chr5 147197967 147197978 DUX4 JASPAR yes 66716599
chr5 147197967 147197978 DUX4 JASPAR yes 70733314
chr5 147197978 147197992 RORA JASPAR yes 66716600
chr5 147197978 147197992 RORA JASPAR yes 70733315
chr5 147198003 147198023 TP53 JASPAR yes 66716601
chr5 147198003 147198023 TP53 JASPAR yes 70733316
chr5 147198011 147198022 STAT1 JASPAR yes 66716602
chr5 147198011 147198022 STAT1 JASPAR yes 70733317
chr5 147198032 147198036 YY1 TRANSFAC yes 66716603
chr5 147198032 147198036 YY1 TRANSFAC yes 70733318
chr5 147198037 147198043 TCF1 TRANSFAC yes 66716604
chr5 147198037 147198043 TCF1 TRANSFAC yes 70733319
chr5 147198047 147198060 NR2F1 JASPAR yes 66716605
chr5 147198047 147198060 NR2F1 JASPAR yes 70733320
chr5 147198051 147198055 ESR1 TRANSFAC yes 66716606
chr5 147198051 147198055 ESR1 TRANSFAC yes 70733321
chr5 147198055 147198071 SOX8 JASPAR yes 66716607
chr5 147198055 147198071 SOX8 JASPAR yes 70733322
chr5 147198063 147198066 MYB TRANSFAC yes 66716608
chr5 147198063 147198066 MYB TRANSFAC yes 70733323
SNP sites on vista49535[chr5:147197647-147198100]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147197715 rs79908204 T A,C
MZF1 TFAP2A
8598664
chr5 147197955 rs114513289 A T
ETV6 IRF1 STAT2
8598665
chr5 147198024 rs6897607 T C no 8598666
chr5 147198034 rs183068309 A G
YY1
8598667
chr5 147198090 rs34099642 AG A no 8598668
Genes possibly regulated by vista49535[chr5:147197647-147198100]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 146967990 147162338 - JAKMIP2 ENSG00000176049.11 147162338 0.93 0.96 5846 64691
chr5 147204131 147211349 - SPINK1 ENSG00000164266.6 147211349 1.0 0.96 5847 86751
chr5 147250245 147261754 + SCGB3A2 ENSG00000164265.4 147250245 1.0 1.0 5848 47855
chr5 147260289 147286101 - C5orf46 ENSG00000178776.4 147286101 0.9 0.93 5849 11999
Expression level of Genes
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miRNAs possibly regulated by vista49535[chr5:147197647-147198100]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results