EnhancerDB
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  3. vista49537[chr5:147218600-147219023]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49537[chr5:147218600-147219023]
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Tissue distribution of vista49537
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Transcription factor that possibly regulate vista49537[chr5:147218600-147219023]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147218600 147218610 HOXA13 JASPAR yes 70733381
chr5 147218600 147218610 HOXD13 JASPAR yes 70733382
chr5 147218631 147218635 TEAD2 TRANSFAC yes 70733383
chr5 147218631 147218636 TBP TRANSFAC yes 70733384
chr5 147218635 147218640 ETS2 TRANSFAC yes 70733385
chr5 147218646 147218656 GSX2 JASPAR yes 70733386
chr5 147218646 147218656 HESX1 JASPAR yes 70733387
chr5 147218646 147218656 LBX2 JASPAR yes 70733388
chr5 147218646 147218656 MIXL1 JASPAR yes 70733389
chr5 147218646 147218656 MNX1 JASPAR yes 70733390
chr5 147218646 147218656 RAX JASPAR yes 70733391
chr5 147218647 147218655 ISX JASPAR yes 70733392
chr5 147218647 147218655 LHX9 JASPAR yes 70733393
chr5 147218647 147218655 LMX1B JASPAR yes 70733394
chr5 147218647 147218655 PRRX1 JASPAR yes 70733395
chr5 147218647 147218655 RAX2 JASPAR yes 70733396
chr5 147218647 147218655 SHOX JASPAR yes 70733397
chr5 147218647 147218655 UNCX JASPAR yes 70733398
chr5 147218648 147218659 BATF JASPAR yes 70733399
chr5 147218650 147218661 FOSL1 JASPAR yes 70733400
chr5 147218673 147218678 TFAP2A TRANSFAC yes 70733401
chr5 147218673 147218679 MZF1 JASPAR yes 70733402
chr5 147218717 147218723 HiNF-A TRANSFAC yes 70733403
chr5 147218737 147218758 REST JASPAR yes 70733404
chr5 147218756 147218764 CEBPA TRANSFAC yes 70733405
chr5 147218770 147218781 NFKB1 JASPAR yes 70733406
chr5 147218771 147218781 NFKB1 JASPAR yes 70733407
chr5 147218771 147218781 REL JASPAR yes 70733408
chr5 147218777 147218789 SRF JASPAR yes 70733409
chr5 147218779 147218790 HOXC13 JASPAR yes 70733410
chr5 147218780 147218790 HOXA13 JASPAR yes 70733411
chr5 147218780 147218790 HOXB13 JASPAR yes 70733412
chr5 147218780 147218790 HOXD13 JASPAR yes 70733413
chr5 147218782 147218786 TEAD2 TRANSFAC yes 70733414
chr5 147218782 147218787 TBP TRANSFAC yes 70733415
chr5 147218782 147218788 TFIID TRANSFAC yes 70733416
chr5 147218789 147218793 NFE TRANSFAC yes 70733417
chr5 147218808 147218819 JUNB JASPAR yes 70733418
chr5 147218816 147218820 NFE TRANSFAC yes 70733419
chr5 147218823 147218838 AR JASPAR yes 70733420
chr5 147218831 147218841 GCM2 JASPAR yes 70733421
chr5 147218832 147218852 PPARG JASPAR yes 70733422
chr5 147218838 147218853 RUNX2 JASPAR yes 70733423
chr5 147218839 147218842 MYB TRANSFAC yes 70733424
chr5 147218845 147218861 ZNF143 JASPAR yes 70733425
chr5 147218849 147218860 FOS JASPAR yes 70733426
chr5 147218850 147218863 DUXA JASPAR yes 70733427
chr5 147218851 147218862 DUX4 JASPAR yes 70733428
chr5 147218864 147218870 MZF1 JASPAR yes 70733429
chr5 147218865 147218879 PLAG1 JASPAR yes 70733430
chr5 147218873 147218877 H4TF2 TRANSFAC yes 70733431
chr5 147218883 147218892 JDP2 JASPAR yes 70733432
chr5 147218890 147218906 ZNF143 JASPAR yes 70733433
chr5 147218892 147218902 GSC2 JASPAR yes 70733434
chr5 147218892 147218902 GSC JASPAR yes 70733435
chr5 147218893 147218901 RHOXF1 JASPAR yes 70733436
chr5 147218893 147218902 PITX3 JASPAR yes 70733437
chr5 147218894 147218909 STAT1 JASPAR yes 70733438
chr5 147218919 147218926 JUN TRANSFAC yes 70733439
chr5 147218919 147218926 SP1 TRANSFAC yes 70733440
chr5 147218928 147218933 SP1 TRANSFAC yes 70733441
chr5 147218930 147218935 TFAP2A TRANSFAC yes 70733442
chr5 147218930 147218936 MZF1 JASPAR yes 70733443
chr5 147218984 147218988 NFE TRANSFAC yes 70733444
chr5 147218984 147218989 GATA1 TRANSFAC yes 70733445
chr5 147218984 147218990 GATA3 JASPAR yes 70733446
chr5 147218989 147219004 FOXA1 JASPAR yes 70733447
chr5 147218990 147219002 FOXI1 JASPAR yes 70733448
chr5 147218993 147218997 YY1 TRANSFAC yes 70733449
chr5 147218996 147219014 MAFF JASPAR yes 70733450
chr5 147218998 147219009 NRL JASPAR yes 70733451
chr5 147218998 147219013 MAFK JASPAR yes 70733452
SNP sites on vista49537[chr5:147218600-147219023]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147218630 rs148046659 T C no 8598734
chr5 147218652 rs142172026 T G
BATF FOSL1 GSX2 HESX1 ISX LBX2 LHX9 LMX1B MIXL1 MNX1 PRRX1 RAX RAX2 SHOX UNCX
8598735
chr5 147218677 rs536698139 G A
MZF1 TFAP2A
8598736
chr5 147218782 rs114188218 T C
HOXA13 HOXB13 HOXC13 HOXD13 SRF TBP TEAD2 TFIID
8598737
chr5 147218800 rs181793471 T C no 8598738
chr5 147218813 rs4705205 C T
JUNB
8598739
chr5 147218850 rs71592202 C G
DUXA FOS PPARG RUNX2 ZNF143
8598740
chr5 147219007 rs560376604 G C
MAFF MAFK NRL
8598741
chr5 147219008 rs116639967 A G
MAFF MAFK NRL
8598742
Genes possibly regulated by vista49537[chr5:147218600-147219023]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 146967990 147162338 - JAKMIP2 ENSG00000176049.11 147162338 0.93 0.96 5846 43738
chr5 147204131 147211349 - SPINK1 ENSG00000164266.6 147211349 1.0 0.96 5847 92749
chr5 147250245 147261754 + SCGB3A2 ENSG00000164265.4 147250245 1.0 1.0 5848 68778
chr5 147260289 147286101 - C5orf46 ENSG00000178776.4 147286101 0.9 0.93 5849 32922
Expression level of Genes
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miRNAs possibly regulated by vista49537[chr5:147218600-147219023]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results