EnhancerDB
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  3. vista49541[chr5:147253882-147254078]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49541[chr5:147253882-147254078]
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Tissue distribution of vista49541
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Transcription factor that possibly regulate vista49541[chr5:147253882-147254078]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147253874 147253885 BATF JASPAR yes 66719240
chr5 147253874 147253885 BATF JASPAR yes 70733597
chr5 147253875 147253886 JUNB JASPAR yes 66719241
chr5 147253875 147253886 JUNB JASPAR yes 70733598
chr5 147253876 147253887 NFE2 JASPAR yes 66719242
chr5 147253876 147253887 NFE2 JASPAR yes 70733599
chr5 147253877 147253886 JDP2 JASPAR yes 66719243
chr5 147253877 147253886 JDP2 JASPAR yes 70733600
chr5 147253889 147253894 ETS2 TRANSFAC yes 66719244
chr5 147253889 147253894 ETS2 TRANSFAC yes 70733601
chr5 147253889 147253899 TEAD4 JASPAR yes 66719245
chr5 147253889 147253899 TEAD4 JASPAR yes 70733602
chr5 147253891 147253901 RELA JASPAR yes 66719246
chr5 147253891 147253901 RELA JASPAR yes 70733603
chr5 147253895 147253915 TBX19 JASPAR yes 66719247
chr5 147253895 147253915 TBX19 JASPAR yes 70733604
chr5 147253902 147253916 BATF3 JASPAR yes 66719248
chr5 147253902 147253916 BATF3 JASPAR yes 70733605
chr5 147253904 147253917 DUXA JASPAR yes 66719249
chr5 147253904 147253917 DUXA JASPAR yes 70733606
chr5 147253904 147253922 MAFF JASPAR yes 66719250
chr5 147253904 147253922 MAFF JASPAR yes 70733607
chr5 147253905 147253916 DUX4 JASPAR yes 66719251
chr5 147253905 147253916 DUX4 JASPAR yes 70733608
chr5 147253905 147253920 MAFK JASPAR yes 66719252
chr5 147253905 147253920 MAFK JASPAR yes 70733609
chr5 147253907 147253920 JUN JASPAR yes 66719253
chr5 147253907 147253920 JUN JASPAR yes 70733610
chr5 147253929 147253947 ESR1 JASPAR yes 66719254
chr5 147253929 147253947 ESR1 JASPAR yes 70733611
chr5 147253934 147253938 YY1 TRANSFAC yes 66719255
chr5 147253934 147253938 YY1 TRANSFAC yes 70733612
chr5 147253953 147253963 TEAD1 JASPAR yes 66719256
chr5 147253953 147253963 TEAD4 JASPAR yes 66719257
chr5 147253953 147253963 TEAD1 JASPAR yes 70733613
chr5 147253953 147253963 TEAD4 JASPAR yes 70733614
chr5 147253954 147253962 TEAD3 JASPAR yes 66719258
chr5 147253954 147253962 TEAD3 JASPAR yes 70733615
chr5 147253958 147253971 JUN JASPAR yes 66719259
chr5 147253958 147253971 JUN JASPAR yes 70733616
chr5 147253972 147253977 SP1 TRANSFAC yes 66719260
chr5 147253972 147253977 SP1 TRANSFAC yes 70733617
chr5 147253976 147253980 LFA1 TRANSFAC yes 66719261
chr5 147253976 147253980 LFA1 TRANSFAC yes 70733618
chr5 147253979 147253997 ESR1 JASPAR yes 66719262
chr5 147253979 147253997 ESR1 JASPAR yes 70733619
chr5 147253981 147253985 LFA1 TRANSFAC yes 66719263
chr5 147253981 147253985 LFA1 TRANSFAC yes 70733620
chr5 147254021 147254027 YY1 JASPAR yes 66719264
chr5 147254021 147254027 YY1 JASPAR yes 70733621
chr5 147254052 147254057 GATA2 JASPAR yes 66719265
chr5 147254052 147254057 GATA2 JASPAR yes 70733622
chr5 147254058 147254064 YY1 JASPAR yes 66719266
chr5 147254058 147254064 YY1 JASPAR yes 70733623
chr5 147254070 147254085 HNF4G JASPAR yes 66719267
chr5 147254070 147254085 HNF4G JASPAR yes 70733624
chr5 147254071 147254086 HNF4A JASPAR yes 66719268
chr5 147254071 147254086 HNF4A JASPAR yes 70733625
SNP sites on vista49541[chr5:147253882-147254078]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147253910 rs145272075 G A
BATF3 DUX4 DUXA JUN MAFF MAFK TBX19
8599031
chr5 147253931 rs11949275 T C
ESR1
8599032
chr5 147254007 rs187859017 C T no 8599033
chr5 147254033 rs192489270 T G no 8599034
Genes possibly regulated by vista49541[chr5:147253882-147254078]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 146967990 147162338 - JAKMIP2 ENSG00000176049.11 147162338 0.93 0.96 5846 8456
chr5 147204131 147211349 - SPINK1 ENSG00000164266.6 147211349 1.0 0.96 5847 57467
chr5 147250245 147261754 + SCGB3A2 ENSG00000164265.4 147250245 1.0 1.0 5848 96363
chr5 147260289 147286101 - C5orf46 ENSG00000178776.4 147286101 0.9 0.93 5849 67977
Expression level of Genes
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miRNAs possibly regulated by vista49541[chr5:147253882-147254078]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results