EnhancerDB
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  3. vista49542[chr5:147266523-147266583]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49542[chr5:147266523-147266583]
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Tissue distribution of vista49542
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Transcription factor that possibly regulate vista49542[chr5:147266523-147266583]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147266548 147266987 CTCF UCSC Txn Factor no Conserved 108536858
chr5 147266527 147266531 YY1 TRANSFAC yes 66719949
chr5 147266527 147266531 YY1 TRANSFAC yes 70733626
chr5 147266527 147266545 SRF JASPAR yes 66719950
chr5 147266527 147266545 SRF JASPAR yes 70733627
chr5 147266529 147266545 SRF JASPAR yes 66719951
chr5 147266529 147266545 SRF JASPAR yes 70733628
chr5 147266536 147266547 DUX4 JASPAR yes 66719952
chr5 147266536 147266547 DUX4 JASPAR yes 70733629
chr5 147266539 147266549 GSC2 JASPAR yes 66719953
chr5 147266539 147266549 GSC JASPAR yes 66719954
chr5 147266539 147266549 GSC2 JASPAR yes 70733630
chr5 147266539 147266549 GSC JASPAR yes 70733631
chr5 147266540 147266548 OTX1 JASPAR yes 66719955
chr5 147266540 147266548 OTX1 JASPAR yes 70733632
chr5 147266540 147266549 PITX3 JASPAR yes 66719956
chr5 147266540 147266549 PITX3 JASPAR yes 70733633
chr5 147266544 147266565 REST JASPAR yes 66719957
chr5 147266544 147266565 REST JASPAR yes 70733634
chr5 147266570 147266582 PBX1 JASPAR yes 66719958
chr5 147266570 147266582 PBX1 JASPAR yes 70733635
SNP sites on vista49542[chr5:147266523-147266583]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista49542[chr5:147266523-147266583]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 147204131 147211349 - SPINK1 ENSG00000164266.6 147211349 1.0 0.96 5847 44826
chr5 147250245 147261754 + SCGB3A2 ENSG00000164265.4 147250245 1.0 1.0 5848 83722
chr5 147260289 147286101 - C5orf46 ENSG00000178776.4 147286101 0.9 0.93 5849 80482
Expression level of Genes
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miRNAs possibly regulated by vista49542[chr5:147266523-147266583]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results