EnhancerDB
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  3. vista49547[chr5:147364399-147364757]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49547[chr5:147364399-147364757]
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Tissue distribution of vista49547
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Transcription factor that possibly regulate vista49547[chr5:147364399-147364757]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147364416 147364422 GATA3 JASPAR yes 70733731
chr5 147364425 147364429 NFE TRANSFAC yes 70733732
chr5 147364433 147364438 USF2 TRANSFAC yes 70733733
chr5 147364444 147364458 POU4F1 JASPAR yes 70733734
chr5 147364444 147364460 POU4F3 JASPAR yes 70733735
chr5 147364445 147364461 POU4F2 JASPAR yes 70733736
chr5 147364445 147364461 POU4F3 JASPAR yes 70733737
chr5 147364447 147364451 YY1 TRANSFAC yes 70733738
chr5 147364447 147364461 POU4F1 JASPAR yes 70733739
chr5 147364453 147364464 PHOX2A JASPAR yes 70733740
chr5 147364453 147364464 PROP1 JASPAR yes 70733741
chr5 147364474 147364479 H4TF1 TRANSFAC yes 70733742
chr5 147364496 147364508 PBX1 JASPAR yes 70733743
chr5 147364500 147364509 SRY JASPAR yes 70733744
chr5 147364503 147364517 ONECUT3 JASPAR yes 70733745
chr5 147364510 147364520 HOXC10 JASPAR yes 70733746
chr5 147364510 147364520 HOXD13 JASPAR yes 70733747
chr5 147364510 147364521 HOXC11 JASPAR yes 70733748
chr5 147364510 147364521 HOXC13 JASPAR yes 70733749
chr5 147364511 147364521 GSX2 JASPAR yes 70733750
chr5 147364512 147364520 NKX6-1 JASPAR yes 70733751
chr5 147364512 147364520 NKX6-2 JASPAR yes 70733752
chr5 147364512 147364522 POU6F2 JASPAR yes 70733753
chr5 147364519 147364533 POU4F1 JASPAR yes 70733754
chr5 147364519 147364535 POU4F2 JASPAR yes 70733755
chr5 147364519 147364535 POU4F3 JASPAR yes 70733756
chr5 147364524 147364528 YY1 TRANSFAC yes 70733757
chr5 147364525 147364535 HOXC10 JASPAR yes 70733758
chr5 147364525 147364535 HOXD11 JASPAR yes 70733759
chr5 147364525 147364536 HOXA10 JASPAR yes 70733760
chr5 147364525 147364536 HOXC11 JASPAR yes 70733761
chr5 147364525 147364536 HOXC12 JASPAR yes 70733762
chr5 147364525 147364536 HOXC13 JASPAR yes 70733763
chr5 147364526 147364535 CDX1 JASPAR yes 70733764
chr5 147364526 147364537 CDX2 JASPAR yes 70733765
chr5 147364532 147364550 MAFF JASPAR yes 70733766
chr5 147364533 147364546 HNF1B JASPAR yes 70733767
chr5 147364534 147364555 MAFG JASPAR yes 70733768
chr5 147364542 147364545 MYB TRANSFAC yes 70733769
chr5 147364554 147364558 YY1 TRANSFAC yes 70733770
chr5 147364564 147364575 HOXC11 JASPAR yes 70733771
chr5 147364565 147364574 CDX1 JASPAR yes 70733772
chr5 147364565 147364575 HOXC10 JASPAR yes 70733773
chr5 147364565 147364575 HOXD11 JASPAR yes 70733774
chr5 147364591 147364600 NKX3-2 JASPAR yes 70733775
chr5 147364594 147364604 HOXC10 JASPAR yes 70733776
chr5 147364594 147364604 HOXD11 JASPAR yes 70733777
chr5 147364594 147364605 HOXC11 JASPAR yes 70733778
chr5 147364594 147364605 HOXC12 JASPAR yes 70733779
chr5 147364595 147364604 CDX1 JASPAR yes 70733780
chr5 147364595 147364606 CDX2 JASPAR yes 70733781
chr5 147364601 147364613 YY1 JASPAR yes 70733782
chr5 147364606 147364610 YY1 TRANSFAC yes 70733783
chr5 147364633 147364643 TBX21 JASPAR yes 70733784
chr5 147364633 147364644 TBX20 JASPAR yes 70733785
chr5 147364633 147364644 TBX2 JASPAR yes 70733786
chr5 147364633 147364646 EOMES JASPAR yes 70733787
chr5 147364634 147364644 TBR1 JASPAR yes 70733788
chr5 147364644 147364647 MYB TRANSFAC yes 70733789
chr5 147364652 147364656 H1TF2 TRANSFAC yes 70733790
chr5 147364652 147364656 NFE TRANSFAC yes 70733791
chr5 147364652 147364656 SRF TRANSFAC yes 70733792
chr5 147364682 147364694 GRHL1 JASPAR yes 70733793
chr5 147364689 147364694 H4TF1 TRANSFAC yes 70733794
chr5 147364695 147364710 FOXA1 JASPAR yes 70733795
chr5 147364699 147364709 NFIA JASPAR yes 70733796
chr5 147364699 147364710 FOXA1 JASPAR yes 70733797
chr5 147364700 147364709 NFIX JASPAR yes 70733798
chr5 147364701 147364707 NFIC JASPAR yes 70733799
chr5 147364730 147364750 RREB1 JASPAR yes 70733800
chr5 147364733 147364739 LEF1 TRANSFAC yes 70733801
chr5 147364733 147364739 SOX10 JASPAR yes 70733802
chr5 147364734 147364754 RREB1 JASPAR yes 70733803
chr5 147364735 147364755 RREB1 JASPAR yes 70733804
chr5 147364736 147364756 RREB1 JASPAR yes 70733805
chr5 147364740 147364750 SP1 JASPAR yes 70733806
chr5 147364742 147364747 SP1 TRANSFAC yes 70733807
chr5 147364743 147364753 SREBF1 JASPAR yes 70733808
chr5 147364743 147364753 SREBF2 JASPAR yes 70733809
chr5 147364746 147364756 SP1 JASPAR yes 70733810
SNP sites on vista49547[chr5:147364399-147364757]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147364628 rs73267148 G A,C no 8599800
chr5 147364636 rs560077965 G A
EOMES TBR1 TBX2 TBX20 TBX21
8599801
chr5 147364688 rs137942880 A C
GRHL1
8599802
Genes possibly regulated by vista49547[chr5:147364399-147364757]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 147260289 147286101 - C5orf46 ENSG00000178776.4 147286101 0.9 0.93 5849 21702
chr5 147405246 147516852 + SPINK5 ENSG00000133710.11 147405246 1.0 1.0 5850 59511
Expression level of Genes
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miRNAs possibly regulated by vista49547[chr5:147364399-147364757]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results