EnhancerDB
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  3. vista49553[chr5:147603808-147604119]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista49553[chr5:147603808-147604119]
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Tissue distribution of vista49553
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Transcription factor that possibly regulate vista49553[chr5:147603808-147604119]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 147603717 147604071 STAT3 UCSC Txn Factor no Conserved 108536862
chr5 147603738 147604030 FOS UCSC Txn Factor no Conserved 108536863
chr5 147603808 147603811 MYB TRANSFAC yes 66738722
chr5 147603808 147603811 MYB TRANSFAC yes 70734125
chr5 147603821 147603837 SOX4 JASPAR yes 66738723
chr5 147603821 147603837 SOX4 JASPAR yes 70734126
chr5 147603857 147603867 HOXA13 JASPAR yes 66738724
chr5 147603857 147603867 HOXB13 JASPAR yes 66738725
chr5 147603857 147603867 HOXD13 JASPAR yes 66738726
chr5 147603857 147603867 HOXA13 JASPAR yes 70734127
chr5 147603857 147603867 HOXB13 JASPAR yes 70734128
chr5 147603857 147603867 HOXD13 JASPAR yes 70734129
chr5 147603876 147603881 ATF1 TRANSFAC yes 66738727
chr5 147603876 147603881 ATF1 TRANSFAC yes 70734130
chr5 147603876 147603886 POU6F2 JASPAR yes 66738728
chr5 147603876 147603886 POU6F2 JASPAR yes 70734131
chr5 147603877 147603887 GSX2 JASPAR yes 66738729
chr5 147603877 147603887 GSX2 JASPAR yes 70734132
chr5 147603877 147603888 HOXA10 JASPAR yes 66738730
chr5 147603877 147603888 HOXC11 JASPAR yes 66738731
chr5 147603877 147603888 HOXA10 JASPAR yes 70734133
chr5 147603877 147603888 HOXC11 JASPAR yes 70734134
chr5 147603878 147603886 NKX6-1 JASPAR yes 66738732
chr5 147603878 147603886 NKX6-1 JASPAR yes 70734135
chr5 147603878 147603888 HOXC10 JASPAR yes 66738733
chr5 147603878 147603888 HOXD11 JASPAR yes 66738734
chr5 147603878 147603888 HOXC10 JASPAR yes 70734136
chr5 147603878 147603888 HOXD11 JASPAR yes 70734137
chr5 147603880 147603884 YY1 TRANSFAC yes 66738735
chr5 147603880 147603884 YY1 TRANSFAC yes 70734138
chr5 147603885 147603903 MAFF JASPAR yes 66738736
chr5 147603885 147603903 MAFF JASPAR yes 70734139
chr5 147603910 147603921 DMRT3 JASPAR yes 66738737
chr5 147603910 147603921 DMRT3 JASPAR yes 70734140
chr5 147603914 147603919 GATA2 JASPAR yes 66738738
chr5 147603914 147603919 GATA2 JASPAR yes 70734141
chr5 147603921 147603927 SP1 TRANSFAC yes 66738739
chr5 147603921 147603927 SP1 TRANSFAC yes 70734142
chr5 147603931 147603940 JDP2 JASPAR yes 66738740
chr5 147603931 147603940 JDP2 JASPAR yes 70734143
chr5 147603937 147603947 HMBOX1 JASPAR yes 66738741
chr5 147603937 147603947 HMBOX1 JASPAR yes 70734144
chr5 147603939 147603942 MYB TRANSFAC yes 66738742
chr5 147603939 147603942 MYB TRANSFAC yes 70734145
chr5 147603939 147603949 PAX3 JASPAR yes 66738743
chr5 147603939 147603949 PAX7 JASPAR yes 66738744
chr5 147603939 147603949 PAX3 JASPAR yes 70734146
chr5 147603939 147603949 PAX7 JASPAR yes 70734147
chr5 147603939 147603954 MEF2A JASPAR yes 66738745
chr5 147603939 147603954 MEF2A JASPAR yes 70734148
chr5 147603940 147603950 POU6F2 JASPAR yes 66738746
chr5 147603940 147603950 POU6F2 JASPAR yes 70734149
chr5 147603941 147603951 GSX1 JASPAR yes 66738747
chr5 147603941 147603951 GSX2 JASPAR yes 66738748
chr5 147603941 147603951 LHX2 JASPAR yes 66738749
chr5 147603941 147603951 MEOX1 JASPAR yes 66738750
chr5 147603941 147603951 MEOX2 JASPAR yes 66738751
chr5 147603941 147603951 MNX1 JASPAR yes 66738752
chr5 147603941 147603951 GSX1 JASPAR yes 70734150
chr5 147603941 147603951 GSX2 JASPAR yes 70734151
chr5 147603941 147603951 LHX2 JASPAR yes 70734152
chr5 147603941 147603951 MEOX1 JASPAR yes 70734153
chr5 147603941 147603951 MEOX2 JASPAR yes 70734154
chr5 147603941 147603951 MNX1 JASPAR yes 70734155
chr5 147603941 147603953 MEF2A JASPAR yes 66738753
chr5 147603941 147603953 MEF2B JASPAR yes 66738754
chr5 147603941 147603953 MEF2D JASPAR yes 66738755
chr5 147603941 147603953 MEF2A JASPAR yes 70734156
chr5 147603941 147603953 MEF2B JASPAR yes 70734157
chr5 147603941 147603953 MEF2D JASPAR yes 70734158
chr5 147603942 147603950 LBX1 JASPAR yes 66738756
chr5 147603942 147603950 PDX1 JASPAR yes 66738757
chr5 147603942 147603950 VAX1 JASPAR yes 66738758
chr5 147603942 147603950 VAX2 JASPAR yes 66738759
chr5 147603942 147603950 VSX1 JASPAR yes 66738760
chr5 147603942 147603950 VSX2 JASPAR yes 66738761
chr5 147603942 147603950 LBX1 JASPAR yes 70734159
chr5 147603942 147603950 PDX1 JASPAR yes 70734160
chr5 147603942 147603950 VAX1 JASPAR yes 70734161
chr5 147603942 147603950 VAX2 JASPAR yes 70734162
chr5 147603942 147603950 VSX1 JASPAR yes 70734163
chr5 147603942 147603950 VSX2 JASPAR yes 70734164
chr5 147603942 147603952 MEF2A JASPAR yes 66738762
chr5 147603942 147603952 MEF2A JASPAR yes 70734165
chr5 147603954 147603971 BCL6B JASPAR yes 66738763
chr5 147603954 147603971 BCL6B JASPAR yes 70734166
chr5 147603955 147603960 H4TF1 TRANSFAC yes 66738764
chr5 147603955 147603960 H4TF1 TRANSFAC yes 70734167
chr5 147603979 147603993 SPIC JASPAR yes 66738765
chr5 147603979 147603993 SPIC JASPAR yes 70734168
chr5 147603989 147604002 POU2F2 JASPAR yes 66738766
chr5 147603989 147604002 POU2F2 JASPAR yes 70734169
chr5 147603993 147604007 FOXF2 JASPAR yes 66738767
chr5 147603993 147604007 FOXF2 JASPAR yes 70734170
chr5 147603995 147604002 TBP TRANSFAC yes 66738768
chr5 147603995 147604002 TFIID TRANSFAC yes 66738769
chr5 147603995 147604002 TBP TRANSFAC yes 70734171
chr5 147603995 147604002 TFIID TRANSFAC yes 70734172
chr5 147603998 147604006 FOXG1 JASPAR yes 66738770
chr5 147603998 147604006 FOXG1 JASPAR yes 70734173
chr5 147604000 147604006 HiNF-A TRANSFAC yes 66738771
chr5 147604000 147604006 HiNF-A TRANSFAC yes 70734174
chr5 147604013 147604024 HOXC13 JASPAR yes 66738772
chr5 147604013 147604024 HOXC13 JASPAR yes 70734175
chr5 147604014 147604024 HOXA13 JASPAR yes 66738773
chr5 147604014 147604024 HOXD13 JASPAR yes 66738774
chr5 147604014 147604024 HOXA13 JASPAR yes 70734176
chr5 147604014 147604024 HOXD13 JASPAR yes 70734177
chr5 147604017 147604025 FOXG1 JASPAR yes 66738775
chr5 147604017 147604025 FOXG1 JASPAR yes 70734178
chr5 147604019 147604025 HiNF-A TRANSFAC yes 66738776
chr5 147604019 147604025 HiNF-A TRANSFAC yes 70734179
chr5 147604027 147604044 BCL6B JASPAR yes 66738777
chr5 147604027 147604044 BCL6B JASPAR yes 70734180
chr5 147604040 147604045 ETS2 TRANSFAC yes 66738778
chr5 147604040 147604045 ETS2 TRANSFAC yes 70734181
chr5 147604042 147604053 E2F6 JASPAR yes 66738779
chr5 147604042 147604053 E2F6 JASPAR yes 70734182
chr5 147604063 147604084 IRF1 JASPAR yes 66738780
chr5 147604063 147604084 IRF1 JASPAR yes 70734183
chr5 147604065 147604080 STAT2 JASPAR yes 66738781
chr5 147604065 147604080 STAT2 JASPAR yes 70734184
chr5 147604070 147604076 TCF4 TRANSFAC yes 66738782
chr5 147604070 147604076 TCF4 TRANSFAC yes 70734185
SNP sites on vista49553[chr5:147603808-147604119]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 147603864 rs77789611 T C
FOS HOXA13 HOXB13 HOXD13 STAT3
8600721
chr5 147603981 rs139372084 TCTTA T
FOS SPIC STAT3
8600722
chr5 147603981 rs33962776 TCTTA T
FOS SPIC STAT3
8600723
chr5 147604030 rs138496390 C T
BCL6B FOS STAT3
8600724
Genes possibly regulated by vista49553[chr5:147603808-147604119]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 147549296 147554961 + SPINK14 ENSG00000196800.2 147549296 0.0 0.0 5851 45488
chr5 147582357 147594700 + SPINK6 ENSG00000178172.2 147582357 1.0 0.93 5852 78549
chr5 147647743 147665817 + SPINK13 ENSG00000214510.5 147647743 0.83 0.92 5853 56376
chr5 147691982 147695485 + SPINK7 ENSG00000145879.6 147691982 0.99 1.0 5854 12137
chr5 147698550 147701891 + AC091948.1 ENSG00000268126.1 147698550 0.0 0.0 5855 5569
chr5 147700766 147719412 + SPINK9 ENSG00000204909.3 147700766 0.9 0.84 5856 3353
Expression level of Genes
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miRNAs possibly regulated by vista49553[chr5:147603808-147604119]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results